C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LIM and senescent cell antigen like domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024395 Lims2 10090 + 18:31931507-31958619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025254 Lims2-201 31931507-31958619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025254
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025254 67.350±39.09 28.544±4.39 106.801±49.12 1.137±0.25 28.209±11.30 34.825±1.81 35.403±4.62 26.179±6.93 21.924±16.39 71.259±8.01 6.964±2.80 18.252±7.28 17.951±15.47 13.354±7.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000197 CIL_000197_0002 CGP 18:31931507-31958619

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0008270 IEA zinc ion binding
GO:0016337 IGI single organismal cell-cell adhesion
GO:0043066 IGI negative regulation of apoptotic process
GO:0045216 IGI cell-cell junction organization
GO:0050680 IGI negative regulation of epithelial cell proliferation
GO:2000178 IGI negative regulation of neural precursor cell proliferation
GO:2000346 IGI negative regulation of hepatocyte proliferation
GO:2001046 IGI positive regulation of integrin-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014976 lims2 LIM and senescent cell antigen-like domains 2 protein_coding Danio_rerio
ENSDARG00000026985 lims1 LIM and senescent cell antigen-like domains 1 protein_coding Danio_rerio
ENSG00000072163 LIMS2 LIM and senescent cell antigen-like domains 2 protein_coding Homo_sapiens

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