C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000197_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000072163-ENSG00000072163 CGP 9606 2:127638381-127681786
GeneTranscriptPositionBiotype
ENSG00000072163 (LIMS2)
LIM and senescent cell antigen-like domains 2 		ENST00000324938 (LIMS2-005) 127638426-127664546 protein_coding
ENST00000355119 (LIMS2-001) 127638428-127675190 protein_coding
ENST00000409254 (LIMS2-012) 127639197-127650538 protein_coding
ENST00000409286 (LIMS2-009) 127638426-127643228 protein_coding
ENST00000409455 (LIMS2-004) 127638428-127674309 protein_coding
ENST00000409754 (LIMS2-008) 127638426-127644110 protein_coding
ENST00000409808 (LIMS2-002) 127638428-127675286 protein_coding
ENST00000410011 (LIMS2-003) 127638428-127681786 protein_coding
ENST00000410038 (LIMS2-006) 127638470-127648253 protein_coding
ENST00000413578 (LIMS2-013) 127638983-127650538 nonsense_mediated_decay
ENST00000426981 (LIMS2-007) 127638381-127642131 protein_coding
ENST00000466410 (LIMS2-011) 127638428-127664452 retained_intron
ENST00000469300 (LIMS2-014) 127638425-127656085 retained_intron
ENST00000476932 (LIMS2-017) 127638426-127664419 retained_intron
ENST00000484252 (LIMS2-015) 127638428-127642351 retained_intron
ENST00000494613 (LIMS2-016) 127638426-127640403 processed_transcript
ENST00000545738 (LIMS2-018) 127638721-127675102 protein_coding
ENST00000582671 (LIMS2-020) 127642125-127646678 processed_transcript
ENST00000612860 (LIMS2-201) 127638430-127644112 protein_coding
ENSG00000144230 (GPR17)
G protein-coupled receptor 17 		ENST00000272644 (GPR17-001) 127646172-127652639 protein_coding
ENST00000393018 (GPR17-003) 127649939-127651755 protein_coding
ENST00000423019 (GPR17-005) 127648117-127651061 protein_coding
ENST00000486700 (GPR17-002) 127645994-127652639 processed_transcript
ENST00000496086 (GPR17-004) 127645994-127651476 processed_transcript
ENST00000544369 (GPR17-201) 127645864-127652638 protein_coding
CIL_000197_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024395-ENSMUSG00000024395 CGP 10090 18:31931507-31958619
GeneTranscriptPositionBiotype
ENSMUSG00000024395 (Lims2)
LIM and senescent cell antigen like domains 2 		ENSMUST00000025254 (Lims2-201) 31931507-31958619 protein_coding
ENSMUSG00000052229 (Gpr17)
G protein-coupled receptor 17 		ENSMUST00000064016 (Gpr17-001) 31942997-31949636 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000197_0001ENSG00000072163ENST00000324938ENST00000355119ENST00000409254ENST00000409286ENST00000409455ENST00000409754ENST00000409808ENST00000410011ENST00000410038ENST00000413578ENST00000426981ENST00000466410ENST00000469300ENST00000476932ENST00000484252ENST00000494613ENST00000545738ENST00000582671ENST00000612860ENSG00000144230ENST00000272644ENST00000393018ENST00000423019ENST00000486700ENST00000496086ENST00000544369CIL_000197_0002ENSMUSG00000024395ENSMUST00000025254ENSMUSG00000052229ENSMUST00000064016
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000197_0001ENSG00000072163ENST00000324938ENST00000355119ENST00000409254ENST00000409286ENST00000409455ENST00000409754ENST00000413578ENST00000469300ENST00000494613ENST00000545738ENST00000612860ENSG00000144230ENST00000272644ENST00000393018ENST00000486700CIL_000197_0002ENSMUSG00000024395ENSMUST00000025254ENSMUSG00000052229ENSMUST00000064016
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072163 ENST00000324938 N/A N/A N/A N/A N/A N/A N/A N/A 3.321±0.00 N/A 0.627±0.00 3.196±0.00 13.558±0.00 2.266±0.00
ENST00000355119 18.494±0.00 35.867±0.00 0.833±0.00 3.586±0.00 19.506±17.90 244.297±0.00 70.447±0.00 17.507±0.00 3.633±0.38 18.095±15.98 6.794±0.00 17.810±1.41 27.726±1.98 39.350±0.00
ENST00000409254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.665±0.00 7.526±0.00 3.854±0.00
ENST00000409286 N/A N/A N/A N/A N/A N/A N/A 6.211±0.00 2.566±0.00 N/A N/A N/A N/A N/A
ENST00000409455 N/A N/A N/A N/A N/A N/A 0.910±0.00 N/A N/A 0.906±0.00 N/A N/A N/A N/A
ENST00000409754 N/A N/A N/A N/A N/A N/A N/A 0.591±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413578 15.022±0.00 N/A N/A 5.513±0.00 N/A N/A N/A 3.585±0.00 N/A N/A N/A N/A N/A 17.165±0.00
ENST00000426981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469300 N/A N/A N/A N/A N/A N/A N/A N/A 1.211±0.00 N/A N/A 0.059±0.00 N/A N/A
ENST00000476932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.728±0.00 N/A N/A
ENST00000545738 N/A 16.001±0.00 0.895±0.00 N/A N/A N/A N/A 1.586±0.00 N/A N/A N/A 9.138±0.00 N/A N/A
ENST00000582671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612860 N/A 17.534±0.00 N/A N/A 21.779±0.00 N/A N/A N/A N/A N/A 1.831±0.00 18.079±0.00 15.478±1.07 N/A
ENSG00000144230 ENST00000272644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A
ENST00000393018 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.397±0.00 N/A N/A N/A N/A
ENST00000423019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486700 N/A N/A N/A 2.534±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024395 ENSMUST00000025254 67.350±39.09 28.544±4.39 106.801±49.12 1.137±0.25 28.209±11.30 34.825±1.81 35.403±4.62 26.179±6.93 21.924±16.39 71.259±8.01 6.964±2.80 18.252±7.28 17.951±15.47 13.354±7.67
ENSMUSG00000052229 ENSMUST00000064016 N/A N/A N/A 1.847±0.76 0.653±0.00 N/A N/A N/A 0.011±0.00 N/A 0.548±0.04 N/A 0.426±0.24 N/A

Loading