C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA binding motif protein 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024491 Rbm27 10090 + 18:42275353-42341542 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046972 Rbm27-201 42275353-42341542 protein_coding
  ENSMUST00000091920 Rbm27-202 42275353-42341542 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000046972ENSMUST00000091920
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000046972 N/A 1.635±0.48 0.435±0.00 0.993±0.10 N/A N/A N/A N/A N/A 2.626±1.00 2.539±1.35 N/A
ENSMUST00000091920 1.173±0.82 N/A 1.529±1.07 1.314±0.30 1.066±0.23 0.994±0.00 0.731±0.00 0.652±0.13 0.366±0.00 1.450±0.55 2.080±0.59 4.267±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J0 CIL_0001J0_0003 CGP 18:42202350-42341542
CIL_0001J5 CIL_0001J5_0003 CGP 18:42275353-42397249

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060521 rbm27 RNA binding motif protein 27 protein_coding Danio_rerio
ENSG00000091009 RBM27 RNA binding motif protein 27 protein_coding Homo_sapiens
ENSG00000275740 RP11-449H3.3 RNA-binding protein 27 {ECO:0000313|Ensembl:ENSP00000475384} protein_coding Homo_sapiens

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