C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001J5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060521-ENSDARG00000006206 CGP 7955 9:56323415-56378648
GeneTranscriptPositionBiotype
ENSDARG00000006206 (pou4f3)
POU domain, class 4, transcription factor 3
ENSDART00000149175 (pou4f3-001) 56377382-56378648 protein_coding
ENSDARG00000060521 (rbm27)
RNA binding motif protein 27
ENSDART00000085365 (rbm27-201) 56323586-56355746 protein_coding
ENSDART00000148928 (rbm27-001) 56323415-56366880 protein_coding
CIL_0001J5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091009-ENSG00000091010 CGP 9606 5:146203600-146340520
GeneTranscriptPositionBiotype
ENSG00000091009 (RBM27)
RNA binding motif protein 27
ENST00000265271 (RBM27-001) 146203600-146289132 protein_coding
ENST00000508019 (RBM27-003) 146261383-146263519 retained_intron
ENSG00000238374 (RNU7-180P)
RNA, U7 small nuclear 180 pseudogene
ENST00000459240 (RNU7-180P-201) 146245191-146245253 snRNA
ENSG00000250025 (CTC-359M8.1)
ENST00000511390 (CTC-359M8.1-002) 146360695-146375425 antisense
ENST00000515598 (CTC-359M8.1-001) 146307098-146376963 antisense
ENSG00000275740 (RP11-449H3.3)
RNA-binding protein 27 {ECO:0000313|Ensembl:ENSP00000475384}
ENST00000506502 (RP11-449H3.3-001) 146203550-146339251 protein_coding
CIL_0001J5_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024491-ENSMUSG00000024497 CGP 10090 18:42275353-42397249
GeneTranscriptPositionBiotype
ENSMUSG00000024491 (Rbm27)
RNA binding motif protein 27
ENSMUST00000046972 (Rbm27-201) 42275353-42341542 protein_coding
ENSMUST00000091920 (Rbm27-202) 42275353-42341542 protein_coding
ENSMUSG00000024497 (Pou4f3)
POU domain, class 4, transcription factor 3
ENSMUST00000025374 (Pou4f3-001) 42394539-42397249 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001J5_0001ENSDARG00000006206ENSDART00000149175ENSDARG00000060521ENSDART00000085365ENSDART00000148928CIL_0001J5_0002ENSG00000091009ENST00000265271ENST00000508019ENSG00000238374ENST00000459240ENSG00000250025ENST00000511390ENST00000515598ENSG00000275740ENST00000506502CIL_0001J5_0003ENSMUSG00000024491ENSMUST00000046972ENSMUST00000091920ENSMUSG00000024497ENSMUST00000025374
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001J5_0001ENSDARG00000006206ENSDART00000149175ENSDARG00000060521ENSDART00000085365ENSDART00000148928CIL_0001J5_0002ENSG00000091009ENST00000265271ENSG00000238374ENST00000459240ENSG00000250025ENST00000511390ENST00000515598ENSG00000275740ENST00000506502CIL_0001J5_0003ENSMUSG00000024491ENSMUST00000046972ENSMUST00000091920ENSMUSG00000024497ENSMUST00000025374
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006206 ENSDART00000149175 N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000060521 ENSDART00000085365 N/A N/A N/A N/A N/A N/A N/A 0.812±0.35 N/A N/A N/A N/A N/A N/A
ENSDART00000148928 N/A N/A N/A N/A N/A N/A 0.994±0.92 N/A 0.895±0.00 N/A 0.259±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091009 ENST00000265271 1.223±0.00 1.078±0.00 N/A 2.135±0.00 1.859±0.00 1.943±0.76 2.007±0.19 1.785±0.20 2.122±1.47 2.170±0.68 3.910±0.00 2.194±0.28 1.771±0.60 5.271±0.01
ENST00000508019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000238374 ENST00000459240 N/A 1.194±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250025 ENST00000511390 0.050±0.00 0.205±0.00 N/A 0.058±0.00 0.161±0.00 0.098±0.00 N/A N/A N/A N/A 0.044±0.00 N/A N/A 0.736±0.00
ENST00000515598 N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00
ENSG00000275740 ENST00000506502 N/A N/A N/A 0.781±0.00 2.954±0.00 0.833±0.00 N/A N/A N/A N/A N/A 0.510±0.00 1.406±0.00 4.827±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024491 ENSMUST00000046972 N/A 1.635±0.48 0.435±0.00 0.993±0.10 N/A N/A N/A N/A N/A N/A N/A 2.626±1.00 2.539±1.35 N/A
ENSMUST00000091920 1.173±0.82 N/A 1.529±1.07 1.314±0.30 1.066±0.23 0.994±0.00 N/A 0.731±0.00 0.652±0.13 N/A 0.366±0.00 1.450±0.55 2.080±0.59 4.267±1.46
ENSMUSG00000024497 ENSMUST00000025374 N/A N/A N/A 1.109±0.94 N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A 0.031±0.00 0.018±0.01

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