C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091920 Rbm27-202 ENSMUSG00000024491 10090 + 18:42275353-42341542 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000091920
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000091920 1.173±0.82 1.529±1.07 1.314±0.30 1.066±0.23 0.994±0.00 0.731±0.00 0.652±0.13 0.366±0.00 1.450±0.55 2.080±0.59 4.267±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J0 CIL_0001J0_0003 CGP 18:42202350-42341542
CIL_0001J5 CIL_0001J5_0003 CGP 18:42275353-42397249

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265271 RBM27-001 protein_coding Homo_sapiens 0 2571
ENST00000506502 RP11-449H3.3-001 protein_coding Homo_sapiens 0 3917
ENST00000508019 RBM27-003 retained_intron Homo_sapiens 0 351

Loading