C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB27B, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024511 Rab27b 10090 - 18:69979131-70141605 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000069749 Rab27b-004 69983656-70053588 protein_coding
  ENSMUST00000117692 Rab27b-003 69983656-70053588 protein_coding
  ENSMUST00000121693 Rab27b-001 69979131-70141605 protein_coding
  ENSMUST00000127217 Rab27b-002 70138164-70141574 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069749ENSMUST00000117692ENSMUST00000121693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069749 0.873±0.31 0.692±0.30 37.897±1.84 1.045±0.43 3.298±2.24 49.198±4.60 0.314±0.16 1.091±0.27 1.672±1.58 10.074±1.11 0.080±0.03 2.856±1.55 0.801±0.17 0.039±0.02
ENSMUST00000117692 0.184±0.00 N/A N/A N/A N/A N/A 0.153±0.00 0.155±0.00 N/A N/A 0.087±0.00 0.640±0.34 0.086±0.00 N/A
ENSMUST00000121693 0.123±0.02 0.063±0.02 7.442±0.00 0.797±0.80 0.285±0.15 N/A 0.077±0.03 0.142±0.03 0.120±0.15 1.370±0.18 0.036±0.01 0.238±0.09 0.077±0.03 0.019±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YZ CIL_0007YZ_0002 VISTA 18:69544647-70146012

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA GTP binding
GO:0005794 IDA Golgi apparatus
GO:0005795 IEA Golgi stack
GO:0006184 IDA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016324 IEA apical plasma membrane
GO:0017157 IEA regulation of exocytosis
GO:0019003 ISS GDP binding
GO:0019904 IEA protein domain specific binding
GO:0030140 IEA trans-Golgi network transport vesicle
GO:0030667 IEA secretory granule membrane
GO:0032585 IEA multivesicular body membrane
GO:0042589 IEA zymogen granule membrane
GO:0045921 IEA positive regulation of exocytosis
GO:0070062 IEA extracellular vesicular exosome
GO:0071985 IEA multivesicular body sorting pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087762 RAB27B RAB27B, member RAS oncogene family protein_coding Danio_rerio
ENSG00000041353 RAB27B RAB27B, member RAS oncogene family protein_coding Homo_sapiens

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