C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB27B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121693 Rab27b-001 ENSMUSG00000024511 10090 - 18:69979131-70141605 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121693
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121693 0.123±0.02 0.063±0.02 7.442±0.00 0.797±0.80 0.285±0.15 0.077±0.03 0.142±0.03 0.120±0.15 1.370±0.18 0.036±0.01 0.238±0.09 0.077±0.03 0.019±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YZ CIL_0007YZ_0002 VISTA 18:69544647-70146012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA GTP binding
GO:0005794 IDA Golgi apparatus
GO:0005795 IEA Golgi stack
GO:0006184 IDA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016324 IEA apical plasma membrane
GO:0017157 IEA regulation of exocytosis
GO:0019003 ISS GDP binding
GO:0019904 IEA protein domain specific binding
GO:0030140 IEA trans-Golgi network transport vesicle
GO:0030667 IEA secretory granule membrane
GO:0032585 IEA multivesicular body membrane
GO:0042589 IEA zymogen granule membrane
GO:0045921 IEA positive regulation of exocytosis
GO:0070062 IEA extracellular vesicular exosome
GO:0071985 IEA multivesicular body sorting pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262094 RAB27B-001 protein_coding Homo_sapiens 0 863
ENST00000586594 RAB27B-003 processed_transcript Homo_sapiens 6e-38 161
ENST00000592334 RAB27B-002 protein_coding Homo_sapiens 0 294

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