C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB27B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117692 Rab27b-003 ENSMUSG00000024511 10090 - 18:69983656-70053588 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyMuscleOvaryPlacentaENSMUST00000117692
Transcript ID Adipose Heart Kidney Muscle Ovary Placenta
ENSMUST00000117692 0.184±0.00 0.153±0.00 0.155±0.00 0.087±0.00 0.640±0.34 0.086±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YZ CIL_0007YZ_0002 VISTA 18:69544647-70146012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IDA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA GTP binding
GO:0005794 IDA Golgi apparatus
GO:0006184 IDA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0019003 ISS GDP binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262094 RAB27B-001 protein_coding Homo_sapiens 0 863
ENST00000586594 RAB27B-003 processed_transcript Homo_sapiens 6e-38 161
ENST00000592334 RAB27B-002 protein_coding Homo_sapiens 0 294

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