C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serum response factor binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024528 Srfbp1 10090 + 18:52465693-52490738 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025406 Srfbp1-201 52465693-52490738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025406
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025406 1.380±0.57 0.465±0.22 7.604±0.56 7.571±1.73 0.764±0.46 0.780±0.22 1.897±0.59 1.908±0.45 3.753±3.32 1.204±0.22 4.340±0.65 3.342±3.99 10.638±4.15 1.951±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B3 CIL_0004B3_0002 CGP 18:52331536-52490738
CIL_0004B2 CIL_0004B2_0002 CGP 18:52465693-52529867

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075323 srfbp1 serum response factor binding protein 1 protein_coding Danio_rerio
ENSG00000151304 SRFBP1 serum response factor binding protein 1 protein_coding Homo_sapiens

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