C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA C330018D20 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024592 C330018D20Rik 10090 - 18:56955833-56975368 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025488 C330018D20Rik-001 56955833-56975368 protein_coding
  ENSMUST00000139243 C330018D20Rik-002 56957614-56975354 protein_coding
  ENSMUST00000152087 C330018D20Rik-003 56968520-56975246 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025488ENSMUST00000139243ENSMUST00000152087
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025488 2.252±0.16 0.811±0.23 3.985±0.43 2.493±0.47 1.357±0.37 1.018±0.37 2.561±0.47 1.988±0.31 3.408±1.82 1.077±0.32 2.358±0.48 1.126±0.51 2.146±1.03 1.322±0.49
ENSMUST00000139243 N/A N/A N/A 0.996±0.00 N/A N/A N/A N/A N/A N/A N/A 1.566±1.01 2.124±1.13 2.168±0.40
ENSMUST00000152087 N/A 0.351±0.21 N/A N/A N/A 0.445±0.31 N/A N/A N/A 0.299±0.00 N/A 0.454±0.24 N/A 1.389±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007S2 CIL_0007S2_0002 VISTA 18:56596918-57198991
CIL_00041K CIL_00041K_0002 CGP 18:56761716-56975368
CIL_0006CT CIL_0006CT_0003 CGP 18:56955833-57297467

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095594 C10H5orf63 chromosome 5 open reading frame 63 protein_coding Danio_rerio
ENSG00000164241 C5orf63 chromosome 5 open reading frame 63 protein_coding Homo_sapiens

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