C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00041K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173926-ENSG00000164241 CGP 9606 5:126867714-127073492
GeneTranscriptPositionBiotype
ENSG00000164241 (C5orf63)
chromosome 5 open reading frame 63
ENST00000296662 (C5orf63-201) 127051304-127073492 protein_coding
ENST00000508527 (C5orf63-002) 127045359-127073480 nonsense_mediated_decay
ENST00000509733 (C5orf63-006) 127052382-127073492 protein_coding
ENST00000515558 (C5orf63-003) 127058753-127073389 retained_intron
ENST00000535381 (C5orf63-202) 127042558-127073492 protein_coding
ENST00000606042 (C5orf63-005) 127051612-127058917 protein_coding
ENST00000606937 (C5orf63-004) 127047527-127071623 protein_coding
ENST00000607731 (C5orf63-001) 127051304-127073467 protein_coding
ENSG00000173926 (MARCH3)
membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
ENST00000308660 (MARCH3-001) 126867714-127030808 protein_coding
ENST00000502289 (MARCH3-003) 126914931-127030169 processed_transcript
ENST00000504239 (MARCH3-005) 126898873-126914990 processed_transcript
ENST00000506088 (MARCH3-006) 126870191-126878397 retained_intron
ENST00000515241 (MARCH3-002) 126914661-126918228 protein_coding
CIL_00041K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032656-ENSMUSG00000024592 CGP 10090 18:56761716-56975368
GeneTranscriptPositionBiotype
ENSMUSG00000024592 (C330018D20Rik)
RIKEN cDNA C330018D20 gene
ENSMUST00000025488 (C330018D20Rik-001) 56955833-56975368 protein_coding
ENSMUST00000139243 (C330018D20Rik-002) 56957614-56975354 protein_coding
ENSMUST00000152087 (C330018D20Rik-003) 56968520-56975246 processed_transcript
ENSMUSG00000032656 (March3)
membrane-associated ring finger (C3HC4) 3
ENSMUST00000035278 (March3-003) 56775852-56812019 protein_coding
ENSMUST00000102912 (March3-001) 56761716-56925548 protein_coding
ENSMUST00000153044 (March3-002) 56803669-56925515 retained_intron
ENSMUSG00000087597 (Gm15345)
predicted gene 15345
ENSMUST00000128240 (Gm15345-001) 56769717-56801688 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041K_0001ENSG00000164241ENST00000296662ENST00000508527ENST00000509733ENST00000515558ENST00000535381ENST00000606042ENST00000606937ENST00000607731ENSG00000173926ENST00000308660ENST00000502289ENST00000504239ENST00000506088ENST00000515241CIL_00041K_0002ENSMUSG00000024592ENSMUST00000025488ENSMUST00000139243ENSMUST00000152087ENSMUSG00000032656ENSMUST00000035278ENSMUST00000102912ENSMUST00000153044ENSMUSG00000087597ENSMUST00000128240
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00041K_0001ENSG00000164241ENST00000296662ENST00000508527ENST00000509733ENST00000535381ENST00000606042ENST00000606937ENST00000607731ENSG00000173926ENST00000308660ENST00000502289ENST00000504239ENST00000506088ENST00000515241CIL_00041K_0002ENSMUSG00000024592ENSMUST00000025488ENSMUST00000139243ENSMUST00000152087ENSMUSG00000032656ENSMUST00000035278ENSMUST00000102912ENSMUSG00000087597ENSMUST00000128240
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164241 ENST00000296662 0.297±0.00 0.357±0.00 N/A 0.432±0.00 0.720±0.00 0.477±0.00 0.727±0.00 N/A 0.437±0.00 N/A 0.147±0.00 0.745±0.05 0.346±0.03 2.316±0.00
ENST00000508527 0.081±0.00 N/A 0.406±0.00 N/A 0.187±0.08 N/A 0.189±0.02 0.186±0.00 N/A 0.444±0.34 0.314±0.00 0.473±0.28 0.059±0.00 1.560±1.13
ENST00000509733 N/A N/A N/A 0.625±0.00 N/A N/A N/A 1.294±0.00 N/A N/A N/A N/A 0.268±0.04 N/A
ENST00000515558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535381 N/A 0.236±0.00 N/A 0.109±0.00 0.272±0.00 N/A N/A 0.036±0.00 0.130±0.09 0.183±0.16 0.063±0.00 0.471±0.00 0.036±0.01 N/A
ENST00000606042 N/A N/A N/A N/A N/A N/A N/A N/A 0.805±0.00 N/A N/A N/A N/A N/A
ENST00000606937 N/A N/A 0.742±0.00 0.609±0.00 N/A 3.919±0.00 0.977±0.00 N/A 0.453±0.00 0.539±0.00 0.720±0.00 1.498±0.00 0.493±0.15 N/A
ENST00000607731 0.466±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173926 ENST00000308660 0.293±0.00 2.507±0.00 0.014±0.00 0.819±0.00 0.317±0.17 1.049±0.89 0.935±0.65 0.361±0.00 0.098±0.05 0.590±0.42 0.209±0.03 0.722±0.14 0.443±0.07 2.041±0.11
ENST00000502289 N/A N/A N/A 2.924±0.00 1.249±0.00 2.711±1.16 N/A N/A N/A 4.881±0.00 0.751±0.33 N/A 1.067±0.00 N/A
ENST00000504239 N/A N/A N/A N/A N/A N/A N/A N/A 1.804±0.00 N/A N/A N/A N/A N/A
ENST00000506088 2.517±0.00 6.333±0.00 N/A 1.011±0.72 1.235±0.00 2.905±1.93 2.663±1.87 0.936±0.00 0.619±0.00 2.624±0.00 N/A 2.118±0.99 2.999±1.36 27.137±19.18
ENST00000515241 N/A N/A 0.407±0.00 0.237±0.00 2.458±0.00 1.774±0.00 N/A N/A 0.745±0.00 0.844±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024592 ENSMUST00000025488 2.252±0.16 0.811±0.23 3.985±0.43 2.493±0.47 1.357±0.37 1.018±0.37 2.561±0.47 1.988±0.31 3.408±1.82 1.077±0.32 2.358±0.48 1.126±0.51 2.146±1.03 1.322±0.49
ENSMUST00000139243 N/A N/A N/A 0.996±0.00 N/A N/A N/A N/A N/A N/A N/A 1.566±1.01 2.124±1.13 2.168±0.40
ENSMUST00000152087 N/A 0.351±0.21 N/A N/A N/A 0.445±0.31 N/A N/A N/A 0.299±0.00 N/A 0.454±0.24 N/A 1.389±0.28
ENSMUSG00000032656 ENSMUST00000035278 7.814±1.10 N/A 1.384±0.00 0.446±0.00 3.298±1.37 4.263±1.15 2.143±0.26 2.916±0.42 24.660±24.84 2.372±0.43 0.388±0.12 1.759±0.66 1.152±0.24 2.764±0.92
ENSMUST00000102912 N/A N/A N/A N/A N/A N/A N/A N/A 17.997±1.03 N/A 0.071±0.01 N/A N/A N/A
ENSMUST00000153044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087597 ENSMUST00000128240 0.335±0.20 0.097±0.01 0.016±0.00 N/A 0.204±0.11 0.095±0.00 0.293±0.25 0.082±0.03 0.188±0.04 0.144±0.05 N/A 0.201±0.13 0.052±0.04 0.044±0.00

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