C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane channel-like gene family 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024749 Tmc1 10090 - 19:20783458-20954202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039500 Tmc1-201 20783458-20954202 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039500
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039500 0.009±0.00 0.127±0.06 0.024±0.00 0.236±0.06 0.011±0.00 0.027±0.02 0.028±0.02 0.041±0.02 0.011±0.00 0.064±0.04 0.020±0.02 0.891±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000W2 CIL_0000W2_0002 CGP 19:20783458-21282289

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005245 IGI voltage-gated calcium channel activity
GO:0009897 IDA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0032426 IDA stereocilium bundle tip
GO:0050910 IGI detection of mechanical stimulus involved in sensory perception of sound
GO:0060005 IGI vestibular reflex
GO:0060117 IMP auditory receptor cell development
GO:0070588 IGI calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056386 tmc1 transmembrane channel-like 1 protein_coding Danio_rerio
ENSG00000165091 TMC1 transmembrane channel-like 1 protein_coding Homo_sapiens

Loading