C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000W2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056386-ENSDARG00000018898 CGP 7955 5:27297276-27338911
GeneTranscriptPositionBiotype
ENSDARG00000018898 (zfand5a)
zinc finger, AN1-type domain 5a
ENSDART00000009952 (zfand5a-001) 27325401-27338908 protein_coding
ENSDART00000134242 (zfand5a-002) 27325391-27326654 processed_transcript
ENSDART00000134773 (zfand5a-003) 27325723-27338908 protein_coding
ENSDART00000139701 (zfand5a-004) 27325394-27338911 protein_coding
ENSDARG00000056386 (tmc1)
transmembrane channel-like 1
ENSDART00000098446 (tmc1-201) 27297949-27311493 protein_coding
ENSDART00000131515 (tmc1-001) 27297276-27309803 protein_coding
CIL_0000W2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024749-ENSMUSG00000024750 CGP 10090 19:20783458-21282289
GeneTranscriptPositionBiotype
ENSMUSG00000024749 (Tmc1)
transmembrane channel-like gene family 1
ENSMUST00000039500 (Tmc1-201) 20783458-20954202 protein_coding
ENSMUSG00000024750 (Zfand5)
zinc finger, AN1-type domain 5
ENSMUST00000025659 (Zfand5-001) 21272278-21282289 protein_coding
ENSMUST00000133175 (Zfand5-003) 21276040-21280971 retained_intron
ENSMUST00000141568 (Zfand5-002) 21275980-21280664 retained_intron
ENSMUST00000149144 (Zfand5-005) 21272687-21280433 nonsense_mediated_decay
ENSMUST00000152338 (Zfand5-004) 21273246-21277038 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000W2_0001ENSDARG00000018898ENSDART00000009952ENSDART00000134242ENSDART00000134773ENSDART00000139701ENSDARG00000056386ENSDART00000098446ENSDART00000131515CIL_0000W2_0002ENSMUSG00000024749ENSMUST00000039500ENSMUSG00000024750ENSMUST00000025659ENSMUST00000133175ENSMUST00000141568ENSMUST00000149144ENSMUST00000152338
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000W2_0001ENSDARG00000018898ENSDART00000009952ENSDART00000134773ENSDART00000139701ENSDARG00000056386ENSDART00000098446ENSDART00000131515CIL_0000W2_0002ENSMUSG00000024749ENSMUST00000039500ENSMUSG00000024750ENSMUST00000025659ENSMUST00000133175ENSMUST00000141568ENSMUST00000149144
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018898 ENSDART00000009952 N/A N/A N/A 11.027±6.49 N/A N/A 10.139±3.03 12.655±1.94 1.843±0.00 N/A 39.671±0.00 N/A N/A N/A
ENSDART00000134242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134773 N/A N/A N/A N/A N/A N/A N/A N/A 0.334±0.00 N/A N/A N/A N/A N/A
ENSDART00000139701 N/A N/A N/A N/A N/A N/A 2.646±0.07 N/A N/A N/A 6.796±0.00 N/A N/A N/A
ENSDARG00000056386 ENSDART00000098446 N/A N/A N/A 0.171±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000131515 N/A N/A N/A 0.243±0.13 N/A N/A 0.050±0.00 0.649±0.28 N/A N/A 0.110±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024749 ENSMUST00000039500 0.009±0.00 0.127±0.06 N/A 0.024±0.00 N/A 0.236±0.06 0.011±0.00 0.027±0.02 0.028±0.02 0.041±0.02 0.011±0.00 0.064±0.04 0.020±0.02 0.891±0.15
ENSMUSG00000024750 ENSMUST00000025659 16.346±6.37 168.755±37.20 36.133±1.01 31.548±9.04 36.161±16.22 50.210±7.38 20.282±1.49 13.746±3.24 14.191±2.44 40.089±10.42 70.737±13.12 67.175±29.57 27.150±1.50 4.438±0.98
ENSMUST00000133175 N/A N/A N/A N/A N/A N/A N/A N/A 1.303±0.00 N/A N/A 2.381±0.06 N/A N/A
ENSMUST00000141568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.692±0.00
ENSMUST00000149144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.131±0.00
ENSMUST00000152338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading