C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-like, containing PHD and RING finger domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024817 Uhrf2 10090 + 19:30030513-30093722 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025739 Uhrf2-001 30030513-30093722 protein_coding
  ENSMUST00000112552 Uhrf2-004 30030589-30057163 protein_coding
  ENSMUST00000123773 Uhrf2-005 30089056-30093722 retained_intron
  ENSMUST00000127244 Uhrf2-006 30085694-30087316 retained_intron
  ENSMUST00000129420 Uhrf2-007 30073783-30075521 retained_intron
  ENSMUST00000134518 Uhrf2-003 30030513-30058812 retained_intron
  ENSMUST00000137368 Uhrf2-002 30030513-30081519 retained_intron
  ENSMUST00000143769 Uhrf2-009 30091961-30092939 retained_intron
  ENSMUST00000150532 Uhrf2-008 30078504-30080245 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025739ENSMUST00000123773ENSMUST00000134518ENSMUST00000143769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025739 6.640±3.38 3.787±0.63 8.869±0.40 15.556±8.25 5.240±2.30 9.034±2.03 2.866±0.38 5.010±0.45 9.690±6.20 5.292±0.92 2.203±0.54 7.908±1.76 12.657±1.89 2.706±0.43
ENSMUST00000123773 7.768±3.45 N/A 10.369±0.57 18.521±11.21 9.824±0.00 N/A 2.284±0.00 5.219±0.57 10.232±6.59 4.808±0.56 1.114±0.00 N/A 8.006±1.38 2.990±0.87
ENSMUST00000134518 N/A 5.084±1.10 N/A N/A N/A 9.239±0.00 N/A N/A N/A N/A N/A 8.787±3.95 N/A N/A
ENSMUST00000143769 N/A N/A N/A N/A 17.840±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D5 CIL_0001D5_0002 CGP 19:30003790-30093722
CIL_0001D8 CIL_0001D8_0002 CGP 19:30030513-30175418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005634 ISS nucleus
GO:0005720 IDA nuclear heterochromatin
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0007049 IEA cell cycle
GO:0008270 IEA zinc ion binding
GO:0008283 ISS cell proliferation
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030154 ISS cell differentiation
GO:0042393 IDA histone binding
GO:0051865 ISS protein autoubiquitination
GO:0071158 ISS positive regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089389 CABZ01073380.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089654 UHRF2 (2 of 2) ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase protein_coding Danio_rerio
ENSDARG00000090666 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase protein_coding Danio_rerio
ENSG00000147854 UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase protein_coding Homo_sapiens

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