C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribonuclease H2, subunit C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024925 Rnaseh2c 10090 + 19:5601873-5603439 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025864 Rnaseh2c-001 5601873-5603439 protein_coding
  ENSMUST00000127071 Rnaseh2c-003 5601887-5602867 retained_intron
  ENSMUST00000133953 Rnaseh2c-005 5602410-5602934 retained_intron
  ENSMUST00000136226 Rnaseh2c-002 5602235-5602938 protein_coding
  ENSMUST00000155639 Rnaseh2c-004 5601975-5602932 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025864ENSMUST00000127071ENSMUST00000136226ENSMUST00000155639
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025864 8.945±1.89 12.839±0.95 16.727±0.31 9.076±2.63 14.478±6.16 4.480±0.60 14.220±3.66 18.782±15.43 10.382±2.87 4.008±0.55 19.174±4.63 23.689±0.00 14.484±0.44
ENSMUST00000127071 9.525±1.05 N/A 21.523±10.12 15.140±2.62 11.767±1.54 N/A 11.758±0.00 26.972±6.25 15.387±0.08 N/A 27.878±8.82 N/A N/A
ENSMUST00000136226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.290±0.00 N/A
ENSMUST00000155639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.485±0.00 N/A 8.591±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006401 ISS RNA catabolic process
GO:0032299 ISS ribonuclease H2 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089637 RNASEH2C (1 of 2) ribonuclease H2, subunit C protein_coding Danio_rerio
ENSDARG00000091285 RNASEH2C (2 of 2) ribonuclease H2, subunit C protein_coding Danio_rerio
ENSG00000172922 RNASEH2C ribonuclease H2, subunit C protein_coding Homo_sapiens

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