C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease H2, subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025864 Rnaseh2c-001 ENSMUSG00000024925 10090 + 19:5601873-5603439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025864
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025864 8.945±1.89 12.839±0.95 16.727±0.31 9.076±2.63 14.478±6.16 4.480±0.60 14.220±3.66 18.782±15.43 10.382±2.87 4.008±0.55 19.174±4.63 23.689±0.00 14.484±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006401 ISS RNA catabolic process
GO:0032299 ISS ribonuclease H2 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308418 RNASEH2C-001 protein_coding Homo_sapiens 0 331
ENST00000527610 RNASEH2C-005 protein_coding Homo_sapiens 0 206
ENST00000528220 RNASEH2C-002 protein_coding Homo_sapiens 0 294
ENST00000531596 RNASEH2C-006 nonsense_mediated_decay Homo_sapiens 0 254
ENST00000533698 RNASEH2C-007 nonsense_mediated_decay Homo_sapiens 0 217
ENST00000534482 RNASEH2C-008 nonsense_mediated_decay Homo_sapiens 0 217

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