C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome P450, family 2, subfamily c, polypeptide 40
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025004 Cyp2c40 10090 - 19:39767071-39812814 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000160476 Cyp2c40-001 39767071-39812814 protein_coding
  ENSMUST00000162434 Cyp2c40-003 39803803-39812749 processed_transcript
  ENSMUST00000162507 Cyp2c40-004 39807239-39812744 protein_coding
  ENSMUST00000162630 Cyp2c40-002 39767227-39812814 nonsense_mediated_decay
  ENSMUST00000163090 Cyp2c40-005 39802609-39807430 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000160476ENSMUST00000162507ENSMUST00000162630
Transcript ID Adipose Adrenal Bladder Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000160476 0.032±0.00 N/A N/A 0.572±0.00 0.035±0.02 N/A 51.976±38.55 N/A 0.081±0.00 N/A
ENSMUST00000162507 N/A N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A
ENSMUST00000162630 0.031±0.00 0.159±0.05 0.005±0.00 3.516±1.99 N/A 0.105±0.06 115.501±109.40 0.071±0.04 0.296±0.14 0.242±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_000U CGP 19:39688834-39812814
CIL_0007H6 CIL_0007H6_000F CGP 19:39767071-39886769

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process
GO:0070330 IEA aromatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007173 cyp2y3 cytochrome P450, family 2, subfamily Y, polypeptide 3 protein_coding Danio_rerio
ENSDARG00000068493 si:zfos-411a11.2 si:zfos-411a11.2 protein_coding Danio_rerio
ENSG00000138109 CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9 protein_coding Homo_sapiens
ENSG00000138115 CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8 protein_coding Homo_sapiens
ENSG00000165841 CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19 protein_coding Homo_sapiens

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