C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydrouridine synthase 1-like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167023 Dus1l-201 ENSMUSG00000025155 10090 - 11:120789202-120796395 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167023
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167023 4.471±0.17 5.136±0.74 7.852±1.19 9.981±5.34 3.842±0.69 2.408±0.40 2.584±0.08 6.043±0.62 11.056±5.96 3.730±0.35 5.453±3.61 9.860±5.78 16.519±6.95 8.124±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VJ CIL_0004VJ_0002 CGP 11:120784272-120796403
CIL_0004VI CIL_0004VI_0002 CGP 11:120789201-120824178

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002943 IEA tRNA dihydrouridine synthesis
GO:0005575 ND cellular_component
GO:0017150 IEA tRNA dihydrouridine synthase activity
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306796 DUS1L-001 protein_coding Homo_sapiens 0 1507
ENST00000354321 DUS1L-002 protein_coding Homo_sapiens 0 1507
ENST00000538833 DUS1L-005 protein_coding Homo_sapiens 0 1013
ENST00000577907 DUS1L-008 protein_coding Homo_sapiens 0 305
ENST00000578176 DUS1L-007 protein_coding Homo_sapiens 0 457
ENST00000578264 DUS1L-010 retained_intron Homo_sapiens 0 579
ENST00000578846 DUS1L-004 retained_intron Homo_sapiens 0 339
ENST00000578907 DUS1L-009 protein_coding Homo_sapiens 0 793
ENST00000582529 DUS1L-006 protein_coding Homo_sapiens 0 1051

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