C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025370 Cdh9 10090 + 15:16778101-16857094 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026432 Cdh9-001 16778101-16857094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000026432
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000026432 0.083±0.05 0.164±0.05 0.067±0.00 2.266±1.88 0.150±0.07 0.020±0.01 0.022±0.01 0.010±0.00 0.024±0.01 0.114±0.04 0.005±0.00 0.106±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MJ CIL_0006MJ_0005 CGP 15:13034200-16857094
CIL_0006MJ CIL_0006MJ_0004 CGP 15:16778101-19014236

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014522 cdh6 cadherin 6 protein_coding Danio_rerio
ENSDARG00000055843 cdh10 cadherin 10, type 2 (T2-cadherin) protein_coding Danio_rerio
ENSDARG00000091395 CABZ01067945.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000113100 CDH9 cadherin 9, type 2 (T1-cadherin) protein_coding Homo_sapiens

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