C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin IIIA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025716 Myo3a 10090 + 2:22227503-22618252 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044749 Myo3a-201 22227503-22618252 protein_coding
  ENSMUST00000138850 Myo3a-004 22227505-22283571 processed_transcript
  ENSMUST00000138863 Myo3a-002 22558215-22618247 protein_coding
  ENSMUST00000142435 Myo3a-003 22227505-22293902 processed_transcript
  ENSMUST00000149423 Myo3a-005 22579711-22602262 processed_transcript
  ENSMUST00000153002 Myo3a-001 22241057-22407454 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000044749ENSMUST00000138850ENSMUST00000138863ENSMUST00000142435ENSMUST00000149423ENSMUST00000153002
Transcript ID Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000044749 0.013±0.00 N/A N/A 0.003±0.00 N/A N/A 0.071±0.02
ENSMUST00000138850 N/A 0.442±0.17 N/A N/A 0.015±0.00 N/A N/A
ENSMUST00000138863 0.017±0.00 0.293±0.00 0.023±0.00 0.005±0.00 0.014±0.00 N/A 0.140±0.10
ENSMUST00000142435 N/A N/A 0.019±0.00 N/A N/A N/A 0.021±0.00
ENSMUST00000149423 N/A N/A N/A N/A 0.159±0.00 N/A N/A
ENSMUST00000153002 0.020±0.00 0.737±0.15 0.018±0.00 N/A 0.010±0.00 0.004±0.00 0.113±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D6 CIL_0002D6_0002 CGP 2:21367542-22618252
CIL_0001XV CIL_0001XV_0002 CGP 2:22227503-22693874

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 IDA microfilament motor activity
GO:0001917 IDA photoreceptor inner segment
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0007605 IMP sensory perception of sound
GO:0016459 IEA myosin complex
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 IDA peptidyl-threonine phosphorylation
GO:0030175 IEA filopodium
GO:0030898 IEA actin-dependent ATPase activity
GO:0031941 IEA filamentous actin
GO:0032426 IDA stereocilium bundle tip
GO:0032433 IDA filopodium tip
GO:0043531 IEA ADP binding
GO:0046777 IDA protein autophosphorylation
GO:0048839 IMP inner ear development
GO:0051015 IDA actin filament binding
GO:0051491 IGI positive regulation of filopodium assembly
GO:0060002 IEA plus-end directed microfilament motor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010186 myo3a myosin IIIA protein_coding Danio_rerio
ENSG00000095777 MYO3A myosin IIIA protein_coding Homo_sapiens

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