C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IIIA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153002 Myo3a-001 ENSMUSG00000025716 10090 + 2:22241057-22407454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyOvaryPlacentaTestisENSMUST00000153002
Transcript ID Brain Colon Kidney Ovary Placenta Testis
ENSMUST00000153002 0.020±0.00 0.737±0.15 0.018±0.00 0.010±0.00 0.004±0.00 0.113±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002D6 CIL_0002D6_0002 CGP 2:21367542-22618252
CIL_0001XV CIL_0001XV_0002 CGP 2:22227503-22693874

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IDA microfilament motor activity
GO:0001917 IDA photoreceptor inner segment
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0007605 IMP sensory perception of sound
GO:0016459 IEA myosin complex
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 IDA peptidyl-threonine phosphorylation
GO:0032426 IDA stereocilium bundle tip
GO:0032433 IDA filopodium tip
GO:0046777 IDA protein autophosphorylation
GO:0048839 IMP inner ear development
GO:0051015 IDA actin filament binding
GO:0051491 IGI positive regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265944 MYO3A-001 protein_coding Homo_sapiens 0 2815
ENST00000376301 MYO3A-004 protein_coding Homo_sapiens 0 778
ENST00000376302 MYO3A-003 protein_coding Homo_sapiens 0 985
ENST00000543632 MYO3A-201 protein_coding Homo_sapiens 0 2276
ENST00000619592 MYO3A-202 protein_coding Homo_sapiens 0 2815

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