C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001XV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095777-ENSG00000136750 CGP 9606 10:25934267-26304558
GeneTranscriptPositionBiotype
ENSG00000095777 (MYO3A)
myosin IIIA 		ENST00000265944 (MYO3A-001) 25934267-26212527 protein_coding
ENST00000376301 (MYO3A-004) 25952100-26017027 protein_coding
ENST00000376302 (MYO3A-003) 25934274-26023481 protein_coding
ENST00000477691 (MYO3A-005) 26165842-26168838 processed_transcript
ENST00000478093 (MYO3A-002) 26203024-26204502 processed_transcript
ENST00000543632 (MYO3A-201) 25935788-26212209 protein_coding
ENST00000619592 (MYO3A-202) 25934267-26211972 protein_coding
ENSG00000136750 (GAD2)
glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 		ENST00000259271 (GAD2-002) 26216665-26304558 protein_coding
ENST00000376248 (GAD2-004) 26218193-26224760 protein_coding
ENST00000376261 (GAD2-001) 26216307-26304558 protein_coding
ENST00000428517 (GAD2-003) 26216733-26219320 protein_coding
CIL_0001XV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025716-ENSMUSG00000026787 CGP 10090 2:22227503-22693874
GeneTranscriptPositionBiotype
ENSMUSG00000025716 (Myo3a)
myosin IIIA 		ENSMUST00000044749 (Myo3a-201) 22227503-22618252 protein_coding
ENSMUST00000138850 (Myo3a-004) 22227505-22283571 processed_transcript
ENSMUST00000138863 (Myo3a-002) 22558215-22618247 protein_coding
ENSMUST00000142435 (Myo3a-003) 22227505-22293902 processed_transcript
ENSMUST00000149423 (Myo3a-005) 22579711-22602262 processed_transcript
ENSMUST00000153002 (Myo3a-001) 22241057-22407454 protein_coding
ENSMUSG00000026787 (Gad2)
glutamic acid decarboxylase 2 		ENSMUST00000028123 (Gad2-001) 22622205-22693874 protein_coding
ENSMUST00000156728 (Gad2-002) 22623304-22630001 processed_transcript
ENSMUSG00000082516 (Gm13342)
predicted gene 13342 		ENSMUST00000121055 (Gm13342-001) 22410525-22410731 processed_pseudogene
ENSMUSG00000082884 (Gm13339)
predicted gene 13339 		ENSMUST00000120651 (Gm13339-001) 22590024-22590533 unprocessed_pseudogene
ENSMUSG00000083563 (Gm13340)
predicted gene 13340 		ENSMUST00000117219 (Gm13340-001) 22588103-22589647 unprocessed_pseudogene
ENSMUSG00000083863 (Gm13341)
predicted gene 13341 		ENSMUST00000120780 (Gm13341-001) 22587291-22587962 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XV_0001ENSG00000095777ENST00000265944ENST00000376301ENST00000376302ENST00000477691ENST00000478093ENST00000543632ENST00000619592ENSG00000136750ENST00000259271ENST00000376248ENST00000376261ENST00000428517CIL_0001XV_0002ENSMUSG00000025716ENSMUST00000044749ENSMUST00000138850ENSMUST00000138863ENSMUST00000142435ENSMUST00000149423ENSMUST00000153002ENSMUSG00000026787ENSMUST00000028123ENSMUST00000156728ENSMUSG00000082516ENSMUST00000121055ENSMUSG00000082884ENSMUST00000120651ENSMUSG00000083563ENSMUST00000117219ENSMUSG00000083863ENSMUST00000120780
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XV_0001ENSG00000095777ENST00000265944ENST00000376301ENST00000376302ENST00000477691ENST00000478093ENST00000543632ENST00000619592ENSG00000136750ENST00000259271ENST00000376261CIL_0001XV_0002ENSMUSG00000025716ENSMUST00000044749ENSMUST00000138850ENSMUST00000138863ENSMUST00000142435ENSMUST00000149423ENSMUST00000153002ENSMUSG00000026787ENSMUST00000028123ENSMUST00000156728ENSMUSG00000082516ENSMUST00000121055ENSMUSG00000082884ENSMUST00000120651ENSMUSG00000083563ENSMUST00000117219ENSMUSG00000083863ENSMUST00000120780
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095777 ENST00000265944 N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.020±0.01 N/A 1.732±0.07
ENST00000376301 N/A N/A N/A 0.036±0.00 N/A N/A N/A 0.102±0.00 N/A 0.087±0.00 N/A N/A N/A N/A
ENST00000376302 N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477691 N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A
ENST00000478093 N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A
ENST00000543632 0.016±0.00 0.048±0.00 N/A 0.065±0.04 0.019±0.00 N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A
ENST00000619592 N/A N/A N/A 0.008±0.00 0.026±0.02 0.026±0.00 0.012±0.00 0.006±0.00 0.018±0.00 0.080±0.07 N/A 0.026±0.00 0.008±0.00 N/A
ENSG00000136750 ENST00000259271 N/A N/A N/A 3.629±0.00 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.10
ENST00000376248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376261 0.008±0.00 N/A N/A 5.712±0.01 0.013±0.00 N/A N/A N/A 0.008±0.00 N/A N/A N/A 0.013±0.00 0.155±0.07
ENST00000428517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025716 ENSMUST00000044749 N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A 0.071±0.02
ENSMUST00000138850 N/A N/A N/A N/A N/A 0.442±0.17 N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A
ENSMUST00000138863 N/A N/A N/A 0.017±0.00 N/A 0.293±0.00 N/A 0.023±0.00 0.005±0.00 N/A N/A 0.014±0.00 N/A 0.140±0.10
ENSMUST00000142435 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A 0.021±0.00
ENSMUST00000149423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A
ENSMUST00000153002 N/A N/A N/A 0.020±0.00 N/A 0.737±0.15 N/A 0.018±0.00 N/A N/A N/A 0.010±0.00 0.004±0.00 0.113±0.07
ENSMUSG00000026787 ENSMUST00000028123 0.014±0.01 0.018±0.00 0.005±0.00 14.505±2.28 0.011±0.00 0.081±0.04 0.016±0.00 0.013±0.01 0.015±0.01 0.016±0.01 N/A 0.069±0.04 0.009±0.00 0.163±0.08
ENSMUST00000156728 N/A N/A N/A N/A N/A 0.271±0.15 N/A N/A 0.008±0.00 N/A N/A 0.033±0.00 N/A 0.488±0.15
ENSMUSG00000082516 ENSMUST00000121055 2.617±0.00 33.292±7.04 0.323±0.06 N/A 4.509±2.95 11.290±6.14 21.726±14.22 43.551±6.17 33.285±27.99 5.275±1.79 N/A 16.757±5.15 N/A 13.772±7.04
ENSMUSG00000082884 ENSMUST00000120651 N/A N/A 0.041±0.00 1.039±1.42 N/A N/A 0.290±0.00 N/A 2.927±2.91 N/A 2.761±1.78 0.662±0.43 0.322±0.36 N/A
ENSMUSG00000083563 ENSMUST00000117219 1.811±1.43 0.379±0.15 1.897±0.57 35.505±43.86 1.935±2.48 0.352±0.14 4.594±1.38 0.956±0.39 1.876±3.26 0.102±0.04 6.891±2.44 0.716±0.72 0.649±0.38 4.063±8.01
ENSMUSG00000083863 ENSMUST00000120780 4.649±2.01 1.182±0.14 2.296±0.73 13.192±17.39 4.044±2.27 1.089±0.53 27.317±5.38 13.728±2.27 10.441±16.04 2.280±0.81 1.547±0.18 1.015±0.74 1.626±1.50 0.537±0.30

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