C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ras homolog gene family, member T2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025733 Rhot2 10090 - 17:25838457-25844851 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043897 Rhot2-001 25838457-25844851 protein_coding
  ENSMUST00000175790 Rhot2-007 25841560-25844306 retained_intron
  ENSMUST00000175869 Rhot2-017 25842256-25844569 processed_transcript
  ENSMUST00000176247 Rhot2-004 25843775-25844530 retained_intron
  ENSMUST00000176522 Rhot2-013 25839274-25840599 retained_intron
  ENSMUST00000176583 Rhot2-008 25841568-25843143 retained_intron
  ENSMUST00000176591 Rhot2-015 25841760-25844417 protein_coding
  ENSMUST00000176602 Rhot2-009 25841386-25842106 retained_intron
  ENSMUST00000176604 Rhot2-012 25841605-25844318 retained_intron
  ENSMUST00000176709 Rhot2-016 25842252-25844525 protein_coding
  ENSMUST00000176857 Rhot2-010 25841337-25843137 retained_intron
  ENSMUST00000176882 Rhot2-014 25840054-25841662 processed_transcript
  ENSMUST00000177062 Rhot2-011 25841256-25842054 retained_intron
  ENSMUST00000177122 Rhot2-003 25838838-25841148 retained_intron
  ENSMUST00000177315 Rhot2-005 25842382-25844542 processed_transcript
  ENSMUST00000177347 Rhot2-006 25842096-25844446 retained_intron
  ENSMUST00000177470 Rhot2-002 25838840-25844463 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043897ENSMUST00000175869ENSMUST00000177122
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043897 19.788±5.03 91.106±15.00 21.689±1.40 22.832±14.45 29.365±7.95 72.490±2.09 56.154±16.48 54.129±3.68 32.744±5.71 27.079±2.56 23.589±4.94 38.985±12.94 15.908±8.42 18.162±2.27
ENSMUST00000175869 N/A N/A N/A 143.673±0.00 N/A N/A N/A N/A N/A N/A N/A 261.901±0.00 69.155±7.39 N/A
ENSMUST00000177122 N/A N/A N/A 22.743±0.00 10.098±0.00 N/A N/A N/A N/A N/A N/A N/A 5.717±0.00 3.886±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GN CIL_0003GN_0002 CGP 17:25834465-25841763

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005509 IEA calcium ion binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006184 IEA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0019725 ISS cellular homeostasis
GO:0031307 ISS integral component of mitochondrial outer membrane
GO:0047497 ISS mitochondrion transport along microtubule
GO:0097345 ISS mitochondrial outer membrane permeabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056328 rhot2 ras homolog gene family, member T2 protein_coding Danio_rerio
ENSG00000140983 RHOT2 ras homolog family member T2 protein_coding Homo_sapiens

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