C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ras homolog family member T2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140983 RHOT2 9606 + 16:668086-674174 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000315082 RHOT2-001 668086-674174 protein_coding
  ENST00000561711 RHOT2-011 671917-672817 retained_intron
  ENST00000561929 RHOT2-014 668209-670940 protein_coding
  ENST00000561983 RHOT2-018 668105-671199 nonsense_mediated_decay
  ENST00000562333 RHOT2-017 668187-671993 nonsense_mediated_decay
  ENST00000562598 RHOT2-016 668182-670538 retained_intron
  ENST00000562708 RHOT2-008 668112-670525 retained_intron
  ENST00000562957 RHOT2-019 672792-673537 retained_intron
  ENST00000563134 RHOT2-024 668106-670993 protein_coding
  ENST00000563637 RHOT2-013 668151-671934 nonsense_mediated_decay
  ENST00000563776 RHOT2-027 668105-671162 retained_intron
  ENST00000564659 RHOT2-023 672668-673972 retained_intron
  ENST00000565004 RHOT2-025 671082-673057 retained_intron
  ENST00000566214 RHOT2-007 668151-670773 nonsense_mediated_decay
  ENST00000566965 RHOT2-006 668560-671785 retained_intron
  ENST00000567017 RHOT2-005 668162-671933 retained_intron
  ENST00000567589 RHOT2-026 670528-671312 retained_intron
  ENST00000568636 RHOT2-004 668658-674125 retained_intron
  ENST00000568950 RHOT2-020 668178-672297 retained_intron
  ENST00000569197 RHOT2-021 672749-674165 protein_coding
  ENST00000569358 RHOT2-022 670455-673059 retained_intron
  ENST00000569675 RHOT2-002 668135-674174 retained_intron
  ENST00000569706 RHOT2-010 668132-668881 retained_intron
  ENST00000569943 RHOT2-012 668353-670959 processed_transcript
  ENST00000570092 RHOT2-009 668124-670507 retained_intron
  ENST00000570280 RHOT2-015 668153-671131 nonsense_mediated_decay
  ENST00000602564 RHOT2-028 668180-673308 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315082ENST00000561929ENST00000562333ENST00000562708ENST00000563134ENST00000563776ENST00000564659ENST00000566214ENST00000566965ENST00000567017ENST00000567589ENST00000569197ENST00000569675
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315082 6.348±0.00 7.417±0.00 N/A 4.356±3.43 13.489±0.00 2.558±1.94 5.446±5.22 12.644±11.72 10.009±0.00 3.708±3.32 2.073±0.00 17.487±11.32 21.824±3.39 17.689±3.36
ENST00000561929 N/A N/A N/A N/A N/A 2.238±0.00 N/A N/A N/A 1.094±0.00 N/A 15.786±0.00 N/A 23.441±0.00
ENST00000562333 N/A N/A N/A N/A 1.533±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562708 14.560±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.039±0.00 N/A N/A N/A
ENST00000563134 N/A N/A 1.771±0.00 N/A N/A N/A N/A 3.335±0.00 N/A N/A N/A 0.902±0.00 N/A N/A
ENST00000563776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.405±0.00 N/A N/A N/A
ENST00000564659 N/A N/A 1.459±0.00 N/A 14.559±0.00 7.674±0.00 N/A N/A N/A N/A N/A 29.353±0.00 N/A N/A
ENST00000566214 N/A N/A N/A N/A N/A N/A 0.826±0.00 N/A N/A 0.676±0.00 N/A N/A N/A N/A
ENST00000566965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.880±0.00 N/A N/A N/A
ENST00000567017 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.732±0.00 N/A 0.338±0.00 N/A N/A
ENST00000567589 N/A N/A N/A N/A 2.353±0.00 N/A N/A 2.560±0.00 N/A N/A N/A N/A N/A N/A
ENST00000569197 N/A N/A N/A 2.580±0.00 N/A N/A 1.179±0.00 N/A N/A 1.530±0.00 5.330±0.00 N/A N/A 41.035±0.00
ENST00000569675 N/A 7.727±0.00 N/A 0.530±0.00 N/A 0.313±0.00 4.076±0.00 N/A N/A 1.642±1.44 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GL CIL_0003GL_0002 CGP 16:649311-674174
CIL_0003GN CIL_0003GN_0001 CGP 16:668086-678268

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005741 IEA mitochondrial outer membrane
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 TAS:IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IDA:IEA membrane
GO:0019725 IMP:IEA cellular homeostasis
GO:0031307 IDA integral component of mitochondrial outer membrane
GO:0047497 IMP mitochondrion transport along microtubule
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome
GO:0097345 IMP mitochondrial outer membrane permeabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056328 rhot2 ras homolog gene family, member T2 protein_coding Danio_rerio
ENSMUSG00000025733 Rhot2 ras homolog gene family, member T2 protein_coding Mus_musculus
ENSMUSG00000093593 Gm20683 predicted gene 20683 protein_coding Mus_musculus

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