C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fas associated factor family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126071 Faf2-001 ENSMUSG00000025873 10090 + 13:54621784-54664068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126071
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126071 12.212±3.78 13.810±1.06 14.381±0.10 8.626±5.09 10.395±0.95 13.211±0.31 3.883±0.32 11.194±0.56 10.290±1.62 11.919±0.82 2.492±0.42 14.104±2.64 12.925±9.09 9.001±3.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0002N7 CIL_0002N7_0002 CGP 13:54592401-54664068
CIL_0000OZ CIL_0000OZ_0003 CGP 13:54621784-54693907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005811 IEA lipid particle
GO:0006986 IEA response to unfolded protein
GO:0031625 IEA ubiquitin protein ligase binding
GO:0034098 IEA Cdc48p-Npl4p-Ufd1p AAA ATPase complex
GO:0034389 IEA lipid particle organization
GO:0035473 IEA lipase binding
GO:0043086 IEA negative regulation of catalytic activity
GO:0043130 IEA ubiquitin binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0055102 IEA lipase inhibitor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261942 FAF2-001 protein_coding Homo_sapiens 0 1938
ENST00000429974 FAF2P1-001 processed_pseudogene Homo_sapiens 0 1146
ENST00000504983 FAF2-006 retained_intron Homo_sapiens 0 416
ENST00000510446 FAF2-005 processed_transcript Homo_sapiens 0 388
ENST00000513627 FAF2-007 retained_intron Homo_sapiens 0 416

Loading