C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2W (putative)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025939 Ube2w 10090 - 1:16540790-16619489 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000117146 Ube2w-001 16569782-16619489 protein_coding
  ENSMUST00000132919 Ube2w-002 16601979-16619284 retained_intron
  ENSMUST00000133639 Ube2w-003 16581936-16619259 nonsense_mediated_decay
  ENSMUST00000136455 Ube2w-004 16584158-16619284 retained_intron
  ENSMUST00000182080 Ube2w-005 16564338-16585398 processed_transcript
  ENSMUST00000182554 Ube2w-006 16540790-16619312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117146ENSMUST00000133639ENSMUST00000136455
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117146 10.644±3.22 1.789±0.76 17.077±2.97 10.256±5.54 6.287±2.14 1.885±0.69 3.572±0.34 6.726±0.83 5.290±2.06 5.640±1.25 2.064±0.28 5.154±3.26 6.654±2.85 14.325±6.10
ENSMUST00000133639 N/A 1.611±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.485±0.00 9.641±0.00
ENSMUST00000136455 N/A 1.557±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NO CIL_0001NO_0002 CGP 1:16228674-16619489
CIL_0005C4 CIL_0005C4_0003 CGP 1:16540790-16657042

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006281 IEA DNA repair
GO:0006513 ISS protein monoubiquitination
GO:0006515 IMP misfolded or incompletely synthesized protein catabolic process
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 IPI ubiquitin protein ligase binding
GO:0043161 IMP proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070979 ISS protein K11-linked ubiquitination
GO:0071218 IMP cellular response to misfolded protein

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044923 ube2w ubiquitin-conjugating enzyme E2W (putative) protein_coding Danio_rerio
ENSDARG00000045360 flj11011l hypothetical protein FLJ11011-like (H. sapiens) protein_coding Danio_rerio
ENSG00000258677 RP11-463D19.2 Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000454445} protein_coding Homo_sapiens

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