C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005C4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044923-ENSDARG00000045359 CGP 7955 2:29908579-29964617
GeneTranscriptPositionBiotype
ENSDARG00000044923 (ube2w)
ubiquitin-conjugating enzyme E2W (putative) 		ENSDART00000130142 (ube2w-001) 29908579-29915038 protein_coding
CIL_0005C4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104343-ENSG00000154582 CGP 9606 8:73780097-73972287
GeneTranscriptPositionBiotype
ENSG00000154582 (TCEB1)
transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 		ENST00000284811 (TCEB1-007) 73946401-73972106 protein_coding
ENST00000518127 (TCEB1-004) 73945119-73972287 protein_coding
ENST00000519082 (TCEB1-009) 73946700-73972252 protein_coding
ENST00000519487 (TCEB1-006) 73946264-73970637 protein_coding
ENST00000520210 (TCEB1-003) 73945608-73972170 protein_coding
ENST00000520242 (TCEB1-001) 73945617-73972247 protein_coding
ENST00000522337 (TCEB1-010) 73946473-73972232 protein_coding
ENST00000523815 (TCEB1-008) 73946534-73971908 protein_coding
ENST00000602840 (TCEB1-005) 73939169-73972186 protein_coding
ENST00000622804 (TCEB1-201) 73945138-73971908 protein_coding
ENSG00000251633 (GYG1P1)
glycogenin 1 pseudogene 1 		ENST00000460864 (GYG1P1-001) 73905357-73915010 unprocessed_pseudogene
ENSG00000253273 (RP11-99A14.1)
 ENST00000519383 (RP11-99A14.1-001) 73831143-73831947 unprocessed_pseudogene
ENSG00000272469 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000607344 (Metazoa_SRP.1-233) 73833773-73834042 misc_RNA
CIL_0005C4_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025939-ENSMUSG00000079658 CGP 10090 1:16540790-16657042
GeneTranscriptPositionBiotype
ENSMUSG00000025939 (Ube2w)
ubiquitin-conjugating enzyme E2W (putative) 		ENSMUST00000117146 (Ube2w-001) 16569782-16619489 protein_coding
ENSMUST00000132919 (Ube2w-002) 16601979-16619284 retained_intron
ENSMUST00000133639 (Ube2w-003) 16581936-16619259 nonsense_mediated_decay
ENSMUST00000136455 (Ube2w-004) 16584158-16619284 retained_intron
ENSMUST00000182080 (Ube2w-005) 16564338-16585398 processed_transcript
ENSMUST00000182554 (Ube2w-006) 16540790-16619312 protein_coding
ENSMUSG00000079658 (Tceb1)
transcription elongation factor B (SIII), polypeptide 1 		ENSMUST00000115352 (Tceb1-001) 16642767-16657042 protein_coding
ENSMUST00000185393 (Tceb1-009) 16643342-16648039 protein_coding
ENSMUST00000185771 (Tceb1-006) 16643191-16656914 protein_coding
ENSMUST00000186541 (Tceb1-010) 16646955-16656915 retained_intron
ENSMUST00000186701 (Tceb1-007) 16643472-16656625 protein_coding
ENSMUST00000186948 (Tceb1-004) 16643142-16657018 protein_coding
ENSMUST00000187910 (Tceb1-005) 16643169-16657038 protein_coding
ENSMUST00000188641 (Tceb1-002) 16641725-16656884 protein_coding
ENSMUST00000188987 (Tceb1-008) 16646836-16656900 retained_intron
ENSMUST00000190986 (Tceb1-011) 16647681-16656878 retained_intron
ENSMUST00000191535 (Tceb1-003) 16647736-16657042 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005C4_0001ENSDARG00000044923ENSDART00000130142CIL_0005C4_0002ENSG00000154582ENST00000284811ENST00000518127ENST00000519082ENST00000519487ENST00000520210ENST00000520242ENST00000522337ENST00000523815ENST00000602840ENST00000622804ENSG00000251633ENST00000460864ENSG00000253273ENST00000519383ENSG00000272469ENST00000607344CIL_0005C4_0003ENSMUSG00000025939ENSMUST00000117146ENSMUST00000132919ENSMUST00000133639ENSMUST00000136455ENSMUST00000182080ENSMUST00000182554ENSMUSG00000079658ENSMUST00000115352ENSMUST00000185393ENSMUST00000185771ENSMUST00000186541ENSMUST00000186701ENSMUST00000186948ENSMUST00000187910ENSMUST00000188641ENSMUST00000188987ENSMUST00000190986ENSMUST00000191535
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005C4_0001ENSDARG00000044923ENSDART00000130142CIL_0005C4_0002ENSG00000154582ENST00000284811ENST00000518127ENST00000519082ENST00000519487ENST00000520242ENST00000522337ENST00000523815ENSG00000251633ENST00000460864ENSG00000253273ENST00000519383ENSG00000272469ENST00000607344CIL_0005C4_0003ENSMUSG00000025939ENSMUST00000117146ENSMUST00000133639ENSMUST00000136455ENSMUSG00000079658ENSMUST00000115352ENSMUST00000185393ENSMUST00000185771ENSMUST00000186701ENSMUST00000186948ENSMUST00000187910ENSMUST00000188641ENSMUST00000188987
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044923 ENSDART00000130142 N/A N/A N/A 4.211±1.09 N/A N/A 5.754±2.31 3.288±1.28 0.358±0.00 N/A 2.180±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154582 ENST00000284811 5.655±0.00 9.927±0.00 N/A 22.668±0.00 9.716±0.00 7.174±0.00 23.922±0.00 19.060±0.00 7.769±0.00 24.434±0.00 5.548±0.00 15.679±6.61 18.060±7.28 21.152±0.00
ENST00000518127 N/A 2.166±0.00 N/A N/A N/A 0.496±0.00 N/A N/A 0.332±0.00 N/A N/A 0.997±0.00 N/A N/A
ENST00000519082 7.375±0.00 N/A N/A N/A 6.891±5.56 9.211±0.00 5.739±4.20 1.711±0.00 2.499±0.00 16.429±0.00 3.594±2.02 22.028±17.15 17.895±0.00 39.140±19.74
ENST00000519487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.902±0.00 5.718±0.00 N/A N/A
ENST00000520210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520242 2.470±0.00 4.396±0.00 1.093±0.00 7.517±0.57 2.283±0.55 2.447±0.48 2.608±0.57 3.249±2.72 1.946±0.27 3.608±0.03 1.786±0.12 7.169±6.69 9.810±6.72 18.633±13.38
ENST00000522337 N/A N/A N/A N/A N/A N/A N/A 0.620±0.00 N/A N/A N/A N/A N/A 18.758±0.00
ENST00000523815 10.763±0.00 15.744±0.00 0.863±0.00 15.242±0.00 12.994±0.00 6.069±5.26 N/A 1.296±0.00 9.323±0.00 N/A 6.367±0.00 42.872±16.62 20.778±8.01 27.356±8.51
ENST00000602840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251633 ENST00000460864 0.018±0.00 N/A N/A 0.039±0.00 0.183±0.00 N/A N/A N/A N/A 0.208±0.00 1.522±0.00 N/A 0.059±0.00 0.450±0.00
ENSG00000253273 ENST00000519383 N/A 0.059±0.00 0.147±0.00 0.034±0.02 0.087±0.03 0.325±0.00 0.137±0.10 0.114±0.00 0.114±0.09 0.089±0.00 0.417±0.00 0.069±0.05 N/A 0.112±0.00
ENSG00000272469 ENST00000607344 N/A 0.233±0.00 N/A 0.282±0.00 N/A 1.589±0.00 N/A 0.487±0.00 N/A 1.406±0.78 N/A 0.399±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025939 ENSMUST00000117146 10.644±3.22 1.789±0.76 17.077±2.97 10.256±5.54 6.287±2.14 1.885±0.69 3.572±0.34 6.726±0.83 5.290±2.06 5.640±1.25 2.064±0.28 5.154±3.26 6.654±2.85 14.325±6.10
ENSMUST00000132919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133639 N/A 1.611±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.485±0.00 9.641±0.00
ENSMUST00000136455 N/A 1.557±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000079658 ENSMUST00000115352 N/A N/A 12.273±0.92 9.015±0.00 N/A 2.511±0.00 N/A 5.210±0.00 11.762±8.74 N/A 7.805±0.95 7.507±0.86 15.512±6.25 N/A
ENSMUST00000185393 N/A 2.749±0.00 45.031±0.00 105.819±0.00 N/A 5.597±0.00 N/A N/A N/A N/A 40.893±8.52 73.096±27.54 92.086±32.93 357.633±0.00
ENSMUST00000185771 N/A N/A N/A N/A N/A 1.245±0.00 N/A 6.110±0.00 N/A 2.696±0.00 12.901±0.00 3.283±1.39 N/A 31.459±4.12
ENSMUST00000186541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186701 N/A 1.419±0.00 N/A N/A N/A 1.602±0.45 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186948 4.522±0.47 N/A 16.178±0.00 N/A 3.650±0.80 2.883±0.00 9.706±2.49 6.524±2.73 14.948±6.85 4.640±0.62 23.562±2.78 N/A 14.597±5.21 N/A
ENSMUST00000187910 3.135±0.00 N/A N/A N/A 2.867±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188641 2.548±0.86 2.898±0.83 16.562±2.75 17.863±7.95 2.436±1.17 2.547±0.83 3.495±1.27 4.649±1.30 5.335±2.57 4.430±0.40 19.629±3.68 3.809±2.45 4.091±2.40 10.234±1.76
ENSMUST00000188987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.309±0.00 N/A N/A
ENSMUST00000190986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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