C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 9430016H08 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025971 9430016H08Rik 10090 + 1:57406328-57417953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027114 9430016H08Rik-001 57406328-57417953 protein_coding
  ENSMUST00000185709 9430016H08Rik-003 57406759-57411632 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027114ENSMUST00000185709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027114 4.180±1.70 5.756±2.15 4.400±1.34 4.966±0.65 3.702±1.79 2.990±1.01 2.445±0.24 3.030±1.81 3.434±1.44 3.046±0.96 3.455±0.35 3.564±1.85 6.301±1.77 1.920±0.30
ENSMUST00000185709 0.887±0.20 3.521±2.23 N/A N/A 1.103±0.58 N/A 0.311±0.00 N/A N/A 0.995±0.11 N/A 1.889±1.87 0.780±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K2 CIL_0002K2_0002 CGP 1:57377620-57407101
CIL_0000JI CIL_0000JI_0003 CGP 1:57388237-57417953
CIL_0002B1 CIL_0002B1_0002 CGP 1:57406328-57948394

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069671 C9H2orf47 chromosome 2 open reading frame 47 protein_coding Danio_rerio
ENSG00000162972 C2orf47 chromosome 2 open reading frame 47 protein_coding Homo_sapiens

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