C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002K2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178074-ENSG00000178074 CGP 9606 2:199911256-199955935
GeneTranscriptPositionBiotype
ENSG00000162971 (TYW5)
tRNA-yW synthesizing protein 5 		ENST00000354611 (TYW5-001) 199929975-199955736 protein_coding
ENST00000441832 (TYW5-003) 199931899-199955503 nonsense_mediated_decay
ENST00000452512 (TYW5-002) 199931333-199955500 processed_transcript
ENST00000483328 (TYW5-005) 199929975-199955736 nonsense_mediated_decay
ENST00000493181 (TYW5-004) 199942058-199955502 retained_intron
ENSG00000162972 (C2orf47)
chromosome 2 open reading frame 47 		ENST00000295079 (C2orf47-201) 199955317-199964108 protein_coding
ENST00000392290 (C2orf47-001) 199955603-199964125 protein_coding
ENST00000435773 (C2orf47-003) 199955821-200008540 protein_coding
ENST00000469156 (C2orf47-002) 199959266-199963836 processed_transcript
ENSG00000178074 (C2orf69)
chromosome 2 open reading frame 69 		ENST00000319974 (C2orf69-001) 199911256-199928273 protein_coding
ENST00000491721 (C2orf69-002) 199911306-199955935 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0002K2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038323-ENSMUSG00000048495 CGP 10090 1:57377620-57407101
GeneTranscriptPositionBiotype
ENSMUSG00000025971 (9430016H08Rik)
RIKEN cDNA 9430016H08 gene 		ENSMUST00000027114 (9430016H08Rik-001) 57406328-57417953 protein_coding
ENSMUST00000185709 (9430016H08Rik-003) 57406759-57411632 retained_intron
ENSMUSG00000038323 (1700066M21Rik)
RIKEN cDNA 1700066M21 gene 		ENSMUST00000042734 (1700066M21Rik-001) 57377620-57385423 protein_coding
ENSMUST00000185952 (1700066M21Rik-002) 57377633-57380162 processed_transcript
ENSMUST00000187255 (1700066M21Rik-003) 57377640-57380078 processed_transcript
ENSMUSG00000048495 (Tyw5)
tRNA-yW synthesizing protein 5 		ENSMUST00000079998 (Tyw5-004) 57388240-57406674 nonsense_mediated_decay
ENSMUST00000097732 (Tyw5-002) 57388240-57406471 retained_intron
ENSMUST00000160118 (Tyw5-006) 57391429-57406471 nonsense_mediated_decay
ENSMUST00000160837 (Tyw5-007) 57388666-57406443 protein_coding
ENSMUST00000161092 (Tyw5-008) 57388686-57391740 retained_intron
ENSMUST00000161727 (Tyw5-010) 57388416-57393698 retained_intron
ENSMUST00000161780 (Tyw5-003) 57393321-57406537 protein_coding
ENSMUST00000162663 (Tyw5-011) 57388405-57390771 processed_transcript
ENSMUST00000162686 (Tyw5-001) 57388237-57407101 protein_coding
ENSMUST00000163039 (Tyw5-009) 57390712-57401522 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002K2_0001ENSG00000162971ENST00000354611ENST00000441832ENST00000452512ENST00000483328ENST00000493181ENSG00000162972ENST00000295079ENST00000392290ENST00000435773ENST00000469156ENSG00000178074ENST00000319974ENST00000491721CIL_0002K2_0002ENSMUSG00000025971ENSMUST00000027114ENSMUST00000185709ENSMUSG00000038323ENSMUST00000042734ENSMUST00000185952ENSMUST00000187255ENSMUSG00000048495ENSMUST00000079998ENSMUST00000097732ENSMUST00000160118ENSMUST00000160837ENSMUST00000161092ENSMUST00000161727ENSMUST00000161780ENSMUST00000162663ENSMUST00000162686ENSMUST00000163039
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002K2_0001ENSG00000162971ENST00000354611ENST00000441832ENST00000483328ENST00000493181ENSG00000162972ENST00000295079ENST00000392290ENSG00000178074ENST00000319974CIL_0002K2_0002ENSMUSG00000025971ENSMUST00000027114ENSMUST00000185709ENSMUSG00000038323ENSMUST00000042734ENSMUST00000185952ENSMUST00000187255ENSMUSG00000048495ENSMUST00000079998ENSMUST00000097732ENSMUST00000162663
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162971 ENST00000354611 N/A N/A N/A N/A N/A N/A N/A 1.018±0.00 N/A N/A N/A 0.804±0.04 0.375±0.00 N/A
ENST00000441832 N/A N/A N/A N/A N/A 1.750±0.00 N/A N/A N/A 1.672±0.00 N/A 2.705±0.83 0.833±0.00 2.159±0.00
ENST00000452512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483328 N/A N/A N/A N/A 0.768±0.00 N/A N/A N/A 0.836±0.00 0.784±0.00 N/A 0.848±0.00 N/A N/A
ENST00000493181 N/A 0.751±0.00 0.457±0.00 N/A 0.694±0.00 0.846±0.00 0.273±0.00 N/A 0.445±0.00 0.893±0.00 N/A 0.567±0.00 N/A N/A
ENSG00000162972 ENST00000295079 N/A N/A N/A N/A N/A N/A N/A N/A 16.511±0.00 4.289±0.00 2.758±0.00 3.352±0.00 N/A N/A
ENST00000392290 5.954±0.00 4.314±0.00 2.684±0.00 N/A 2.699±0.00 4.526±1.24 4.226±2.57 10.057±1.77 N/A N/A 3.287±0.79 7.247±0.12 6.263±1.52 4.655±1.56
ENST00000435773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178074 ENST00000319974 6.303±0.00 3.768±0.00 1.883±0.00 10.405±1.82 5.573±2.32 2.873±0.04 2.327±0.99 2.970±1.53 2.893±0.41 2.841±0.14 1.547±0.60 3.173±0.98 1.362±0.17 5.455±1.46
ENST00000491721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025971 ENSMUST00000027114 4.180±1.70 5.756±2.15 4.400±1.34 4.966±0.65 3.702±1.79 2.990±1.01 2.445±0.24 3.030±1.81 3.434±1.44 3.046±0.96 3.455±0.35 3.564±1.85 6.301±1.77 1.920±0.30
ENSMUST00000185709 0.887±0.20 3.521±2.23 N/A N/A 1.103±0.58 N/A 0.311±0.00 N/A N/A 0.995±0.11 N/A 1.889±1.87 0.780±0.00 N/A
ENSMUSG00000038323 ENSMUST00000042734 1.158±0.08 1.851±0.48 1.507±0.51 4.401±1.15 1.449±0.30 1.028±0.35 0.484±0.09 1.220±0.24 4.028±1.25 1.235±0.11 0.729±0.15 1.678±0.72 1.448±0.81 3.820±0.75
ENSMUST00000185952 N/A N/A N/A N/A 1.050±0.15 0.852±0.18 0.389±0.00 N/A 1.902±0.17 0.730±0.00 N/A 0.860±0.00 N/A N/A
ENSMUST00000187255 3.324±0.49 23.459±18.87 N/A N/A 3.485±0.32 5.301±2.63 N/A 3.672±1.26 4.716±0.91 2.904±0.54 N/A 5.153±2.91 N/A N/A
ENSMUSG00000048495 ENSMUST00000079998 N/A N/A N/A N/A N/A N/A N/A N/A 3.378±0.31 N/A 1.444±0.00 3.156±0.15 6.093±1.00 N/A
ENSMUST00000097732 N/A N/A 5.383±1.66 2.948±0.23 N/A N/A N/A N/A N/A N/A N/A 1.807±0.04 2.969±0.00 N/A
ENSMUST00000160118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162663 N/A N/A N/A 24.077±0.00 9.010±0.00 N/A N/A N/A 5.885±0.46 N/A N/A 26.167±0.00 45.003±4.59 6.323±0.00
ENSMUST00000162686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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