C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 9430016H08 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027114 9430016H08Rik-001 ENSMUSG00000025971 10090 + 1:57406328-57417953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027114
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027114 4.180±1.70 5.756±2.15 4.400±1.34 4.966±0.65 3.702±1.79 2.990±1.01 2.445±0.24 3.030±1.81 3.434±1.44 3.046±0.96 3.455±0.35 3.564±1.85 6.301±1.77 1.920±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K2 CIL_0002K2_0002 CGP 1:57377620-57407101
CIL_0000JI CIL_0000JI_0003 CGP 1:57388237-57417953
CIL_0002B1 CIL_0002B1_0002 CGP 1:57406328-57948394

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295079 C2orf47-201 protein_coding Homo_sapiens 0 913
ENST00000392290 C2orf47-001 protein_coding Homo_sapiens 0 913
ENST00000435773 C2orf47-003 protein_coding Homo_sapiens 0 457
ENST00000469156 C2orf47-002 processed_transcript Homo_sapiens 0 252

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