C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trafficking protein, kinesin binding 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026028 Trak2 10090 - 1:58900449-58973430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027186 Trak2-001 58900449-58973430 protein_coding
  ENSMUST00000172685 Trak2-004 58903672-58907212 retained_intron
  ENSMUST00000173590 Trak2-005 58926663-58973429 protein_coding
  ENSMUST00000173719 Trak2-003 58945902-58973430 retained_intron
  ENSMUST00000174120 Trak2-002 58903504-58946337 protein_coding
  ENSMUST00000174359 Trak2-006 58919896-58921697 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027186ENSMUST00000172685ENSMUST00000173590ENSMUST00000174120
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027186 7.205±1.16 5.806±1.60 6.683±1.14 6.523±1.61 6.615±0.89 4.729±1.65 20.104±2.44 17.954±0.73 20.710±21.87 9.211±0.88 16.431±3.45 5.961±3.27 9.008±4.28 0.848±0.35
ENSMUST00000172685 N/A 10.669±2.12 N/A N/A 7.421±1.78 9.163±1.62 N/A 14.799±0.00 3.178±0.09 9.311±0.41 N/A 6.622±0.83 N/A 1.020±0.00
ENSMUST00000173590 N/A 15.683±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174120 N/A N/A N/A 17.097±0.00 N/A N/A N/A N/A N/A N/A N/A 7.239±0.00 7.297±1.32 0.532±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0002 VISTA 1:58652904-59256413
CIL_0000JJ CIL_0000JJ_0003 CGP 1:58900449-58995715

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006493 IEA protein O-linked glycosylation
GO:0006605 IEA protein targeting
GO:0019899 IEA enzyme binding
GO:0050811 IEA GABA receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078872 trak2 trafficking protein, kinesin binding 2 protein_coding Danio_rerio
ENSG00000115993 TRAK2 trafficking protein, kinesin binding 2 protein_coding Homo_sapiens

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