C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein, kinesin binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027186 Trak2-001 ENSMUSG00000026028 10090 - 1:58900449-58973430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027186
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027186 7.205±1.16 5.806±1.60 6.683±1.14 6.523±1.61 6.615±0.89 4.729±1.65 20.104±2.44 17.954±0.73 20.710±21.87 9.211±0.88 16.431±3.45 5.961±3.27 9.008±4.28 0.848±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0002 VISTA 1:58652904-59256413
CIL_0000JJ CIL_0000JJ_0003 CGP 1:58900449-58995715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006493 IEA protein O-linked glycosylation
GO:0006605 IEA protein targeting
GO:0019899 IEA enzyme binding
GO:0050811 IEA GABA receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332624 TRAK2-001 protein_coding Homo_sapiens 0 3171
ENST00000430254 TRAK2-002 protein_coding Homo_sapiens 0 1286
ENST00000486291 TRAK2-003 retained_intron Homo_sapiens 0 377
ENST00000620184 TRAK2-201 protein_coding Homo_sapiens 0 3169

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