C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ArfGAP with FG repeats 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026159 Agfg1 10090 + 1:82839483-82901182 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063380 Agfg1-005 82839671-82896279 protein_coding
  ENSMUST00000113444 Agfg1-004 82839497-82896381 protein_coding
  ENSMUST00000186043 Agfg1-008 82840073-82880122 protein_coding
  ENSMUST00000186302 Agfg1-002 82839674-82895675 protein_coding
  ENSMUST00000187899 Agfg1-006 82839674-82895521 protein_coding
  ENSMUST00000189220 Agfg1-001 82839483-82901182 protein_coding
  ENSMUST00000190046 Agfg1-007 82839734-82895122 protein_coding
  ENSMUST00000190052 Agfg1-003 82839669-82896381 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063380ENSMUST00000113444ENSMUST00000186302ENSMUST00000187899ENSMUST00000189220ENSMUST00000190046ENSMUST00000190052
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063380 N/A N/A N/A N/A N/A N/A N/A N/A 1.229±0.00 N/A 1.302±0.00 N/A 6.675±3.75 1.374±0.00
ENSMUST00000113444 N/A 7.109±1.66 N/A N/A 4.784±0.39 3.247±0.80 N/A 2.485±0.00 4.813±3.37 5.271±0.00 N/A 7.329±1.60 N/A 11.958±2.89
ENSMUST00000186302 13.623±3.71 9.397±2.80 8.163±0.72 N/A 18.375±1.84 6.053±1.51 6.379±1.08 11.145±0.77 15.907±14.86 22.047±3.26 2.415±0.39 12.166±5.56 18.609±12.06 40.717±18.63
ENSMUST00000187899 N/A 6.075±0.00 N/A 13.264±2.47 N/A N/A N/A N/A 1.340±0.00 N/A N/A N/A N/A N/A
ENSMUST00000189220 2.719±0.78 5.965±3.04 5.651±0.49 6.040±3.18 3.608±0.76 2.861±0.61 1.330±0.14 2.466±0.82 5.965±3.27 6.591±0.66 0.736±0.00 4.149±1.72 3.749±0.74 0.229±0.00
ENSMUST00000190046 5.375±0.41 14.533±6.64 N/A N/A 10.258±2.58 8.615±3.20 6.758±0.62 7.554±1.97 3.724±1.15 16.645±2.95 2.367±0.00 17.506±4.11 N/A 25.468±4.29
ENSMUST00000190052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.933±0.45 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076V CIL_00076V_0002 CGP 1:82756649-82901182

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001675 IMP acrosome assembly
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006810 IEA transport
GO:0007275 IEA multicellular organismal development
GO:0007289 IMP spermatid nucleus differentiation
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0032312 IEA regulation of ARF GTPase activity
GO:0042995 IDA cell projection
GO:0043025 IDA neuronal cell body
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043547 IEA positive regulation of GTPase activity
GO:0045109 IMP intermediate filament organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019526 agfg1b ArfGAP with FG repeats 1b protein_coding Danio_rerio
ENSG00000173744 AGFG1 ArfGAP with FG repeats 1 protein_coding Homo_sapiens

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