C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00076V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168955-ENSG00000173744 CGP 9606 2:227362156-227561214
GeneTranscriptPositionBiotype
ENSG00000168955 (TM4SF20)
transmembrane 4 L six family member 20 		ENST00000304568 (TM4SF20-001) 227362156-227379306 protein_coding
ENST00000449706 (TM4SF20-002) 227379226-227381995 protein_coding
ENSG00000173744 (AGFG1)
ArfGAP with FG repeats 1 		ENST00000310078 (AGFG1-001) 227472162-227561214 protein_coding
ENST00000373671 (AGFG1-002) 227472372-227554545 protein_coding
ENST00000409171 (AGFG1-005) 227472372-227554545 protein_coding
ENST00000409315 (AGFG1-004) 227472369-227555728 protein_coding
ENST00000409979 (AGFG1-003) 227472152-227554559 protein_coding
ENST00000456594 (AGFG1-006) 227508272-227533681 protein_coding
ENST00000458212 (AGFG1-008) 227536955-227554912 protein_coding
ENST00000486932 (AGFG1-007) 227510721-227524904 processed_transcript
CIL_00076V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026149-ENSMUSG00000026159 CGP 10090 1:82756649-82901182
GeneTranscriptPositionBiotype
ENSMUSG00000026149 (Tm4sf20)
transmembrane 4 L six family member 20 		ENSMUST00000027331 (Tm4sf20-001) 82756649-82768461 protein_coding
ENSMUST00000138787 (Tm4sf20-002) 82757402-82768461 processed_transcript
ENSMUSG00000026159 (Agfg1)
ArfGAP with FG repeats 1 		ENSMUST00000063380 (Agfg1-005) 82839671-82896279 protein_coding
ENSMUST00000113444 (Agfg1-004) 82839497-82896381 protein_coding
ENSMUST00000186043 (Agfg1-008) 82840073-82880122 protein_coding
ENSMUST00000186302 (Agfg1-002) 82839674-82895675 protein_coding
ENSMUST00000187899 (Agfg1-006) 82839674-82895521 protein_coding
ENSMUST00000189220 (Agfg1-001) 82839483-82901182 protein_coding
ENSMUST00000190046 (Agfg1-007) 82839734-82895122 protein_coding
ENSMUST00000190052 (Agfg1-003) 82839669-82896381 protein_coding
ENSMUSG00000099771 (RP23-404A6.4)
predicted gene, 19257 		ENSMUST00000186121 (RP23-404A6.4-001) 82777028-82777210 processed_pseudogene
ENSMUSG00000100170 (RP23-404A6.6)
predicted gene 28942 		ENSMUST00000186334 (RP23-404A6.6-001) 82819835-82820377 lincRNA
ENSMUSG00000100744 (RP23-404A6.7)
predicted gene, 17764 		ENSMUST00000185925 (RP23-404A6.7-001) 82822471-82822861 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00076V_0001ENSG00000168955ENST00000304568ENST00000449706ENSG00000173744ENST00000310078ENST00000373671ENST00000409171ENST00000409315ENST00000409979ENST00000456594ENST00000458212ENST00000486932CIL_00076V_0002ENSMUSG00000026149ENSMUST00000027331ENSMUST00000138787ENSMUSG00000026159ENSMUST00000063380ENSMUST00000113444ENSMUST00000186043ENSMUST00000186302ENSMUST00000187899ENSMUST00000189220ENSMUST00000190046ENSMUST00000190052ENSMUSG00000099771ENSMUST00000186121ENSMUSG00000100170ENSMUST00000186334ENSMUSG00000100744ENSMUST00000185925
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00076V_0001ENSG00000168955ENST00000304568ENST00000449706ENSG00000173744ENST00000310078ENST00000409171ENST00000409315ENST00000409979ENST00000458212ENST00000486932CIL_00076V_0002ENSMUSG00000026149ENSMUST00000027331ENSMUST00000138787ENSMUSG00000026159ENSMUST00000063380ENSMUST00000113444ENSMUST00000186302ENSMUST00000187899ENSMUST00000189220ENSMUST00000190046ENSMUST00000190052ENSMUSG00000099771ENSMUST00000186121ENSMUSG00000100170ENSMUST00000186334ENSMUSG00000100744ENSMUST00000185925
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168955 ENST00000304568 0.018±0.00 0.104±0.00 N/A 0.077±0.03 0.085±0.00 0.120±0.05 0.004±0.00 0.038±0.00 0.004±0.00 0.056±0.00 N/A 0.097±0.09 0.013±0.00 0.163±0.05
ENST00000449706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.386±0.21
ENSG00000173744 ENST00000310078 5.601±0.00 1.846±0.00 N/A 3.313±0.00 4.730±0.88 0.721±0.09 0.736±0.28 3.159±0.00 1.271±0.51 1.841±0.05 0.567±0.00 3.769±0.75 3.969±1.76 7.993±3.56
ENST00000373671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409171 15.129±0.00 9.068±0.00 2.337±0.00 N/A 12.486±0.00 5.841±0.00 N/A 5.115±0.00 2.636±0.00 8.524±2.27 N/A 6.903±1.33 10.812±0.37 14.327±0.00
ENST00000409315 4.083±0.00 N/A N/A N/A N/A 1.316±0.00 1.467±0.00 3.456±0.00 1.297±0.00 2.753±0.00 N/A N/A 5.364±0.04 7.713±0.00
ENST00000409979 N/A N/A N/A N/A N/A N/A 4.076±1.93 N/A N/A N/A 3.119±1.22 N/A N/A N/A
ENST00000456594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458212 N/A N/A N/A N/A N/A 6.681±0.00 6.098±0.00 7.868±0.00 4.789±0.00 10.700±0.00 N/A N/A 11.479±0.89 N/A
ENST00000486932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.753±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026149 ENSMUST00000027331 0.045±0.01 0.125±0.00 0.150±0.01 0.031±0.02 0.140±0.00 48.328±4.93 0.045±0.00 0.038±0.02 0.079±0.03 0.166±0.05 N/A 0.118±0.10 0.023±0.01 0.036±0.02
ENSMUST00000138787 N/A N/A N/A N/A 0.212±0.04 53.014±11.15 N/A N/A 0.163±0.00 0.196±0.01 0.071±0.00 0.057±0.00 0.246±0.04 N/A
ENSMUSG00000026159 ENSMUST00000063380 N/A N/A N/A N/A N/A N/A N/A N/A 1.229±0.00 N/A 1.302±0.00 N/A 6.675±3.75 1.374±0.00
ENSMUST00000113444 N/A 7.109±1.66 N/A N/A 4.784±0.39 3.247±0.80 N/A 2.485±0.00 4.813±3.37 5.271±0.00 N/A 7.329±1.60 N/A 11.958±2.89
ENSMUST00000186043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186302 13.623±3.71 9.397±2.80 8.163±0.72 N/A 18.375±1.84 6.053±1.51 6.379±1.08 11.145±0.77 15.907±14.86 22.047±3.26 2.415±0.39 12.166±5.56 18.609±12.06 40.717±18.63
ENSMUST00000187899 N/A 6.075±0.00 N/A 13.264±2.47 N/A N/A N/A N/A 1.340±0.00 N/A N/A N/A N/A N/A
ENSMUST00000189220 2.719±0.78 5.965±3.04 5.651±0.49 6.040±3.18 3.608±0.76 2.861±0.61 1.330±0.14 2.466±0.82 5.965±3.27 6.591±0.66 0.736±0.00 4.149±1.72 3.749±0.74 0.229±0.00
ENSMUST00000190046 5.375±0.41 14.533±6.64 N/A N/A 10.258±2.58 8.615±3.20 6.758±0.62 7.554±1.97 3.724±1.15 16.645±2.95 2.367±0.00 17.506±4.11 N/A 25.468±4.29
ENSMUST00000190052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.933±0.45 N/A N/A N/A
ENSMUSG00000099771 ENSMUST00000186121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.291±0.00
ENSMUSG00000100170 ENSMUST00000186334 0.255±0.05 N/A N/A N/A 1.324±0.79 N/A N/A N/A 0.280±0.00 0.307±0.04 N/A 1.546±0.00 0.188±0.05 N/A
ENSMUSG00000100744 ENSMUST00000185925 0.262±0.05 N/A N/A N/A 0.647±0.37 N/A N/A N/A 0.995±0.00 N/A N/A 0.178±0.00 0.185±0.11 N/A

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