C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and SOCS box-containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188879 Asb1-006 ENSMUSG00000026311 10090 + 1:91541080-91555117 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverOvaryPlacentaTestisENSMUST00000188879
Transcript ID Adrenal Colon Liver Ovary Placenta Testis
ENSMUST00000188879 2.035±0.15 1.208±0.00 1.373±0.55 2.747±0.62 2.820±0.13 31.954±6.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UF CIL_0004UF_0003 CGP 1:91494647-91559589
CIL_0003NF CIL_0003NF_0002 CGP 1:91540544-91848028

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0016567 IEA protein ubiquitination
GO:0030539 IMP male genitalia development
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264607 ASB1-001 protein_coding Homo_sapiens 0 1103
ENST00000409297 ASB1-004 protein_coding Homo_sapiens 0 582
ENST00000438264 ASB1-005 nonsense_mediated_decay Homo_sapiens 0 917
ENST00000463352 ASB1-002 processed_transcript Homo_sapiens 0 564
ENST00000468122 ASB1-007 processed_transcript Homo_sapiens 0 442
ENST00000469885 ASB1-003 processed_transcript Homo_sapiens 0 409
ENST00000491653 ASB1-006 retained_intron Homo_sapiens 0 647

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