C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nucleolar protein interacting with the FHA domain of MKI67
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112688 Nifk-002 ENSMUSG00000026377 10090 + 1:118321854-118332941 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000112688
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000112688 6.214±0.00 13.944±0.00 12.018±7.37 11.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VI CIL_0001VI_0002 CGP 1:118321839-118612678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 ISO RNA binding
GO:0005730 ISO nucleolus
GO:0005737 ISO cytoplasm
GO:0010923 ISS negative regulation of phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285814 NIFK-001 protein_coding Homo_sapiens 0 206
ENST00000398317 NIFKP1-001 processed_pseudogene Homo_sapiens 4e-36 156
ENST00000447132 NIFK-005 protein_coding Homo_sapiens 0 206
ENST00000451734 NIFK-004 protein_coding Homo_sapiens 0 206
ENST00000477693 NIFK-003 retained_intron Homo_sapiens 0 206
ENST00000567275 NIFKP4-001 processed_pseudogene Homo_sapiens 2e-40 171
ENST00000598115 NIFKP6-001 processed_pseudogene Homo_sapiens 7.00649e-44 182
ENST00000605689 RP11-697E2.9-001 processed_pseudogene Homo_sapiens 9e-38 161

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