C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fumarate hydratase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026526 Fh1 10090 - 1:175600374-175625635 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027810 Fh1-001 175600374-175625635 protein_coding
  ENSMUST00000130996 Fh1-004 175601376-175604285 retained_intron
  ENSMUST00000133218 Fh1-003 175601378-175606647 retained_intron
  ENSMUST00000154956 Fh1-002 175614776-175625573 nonsense_mediated_decay
  ENSMUST00000176740 Fh1-005 175601384-175609713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027810ENSMUST00000154956ENSMUST00000176740
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027810 18.764±5.29 22.104±6.34 3.217±0.00 6.318±2.92 18.759±4.74 17.037±9.04 32.315±7.88 30.148±12.67 33.163±7.71 6.366±4.73 48.924±19.72 20.194±4.96 14.688±12.04 2.984±2.42
ENSMUST00000154956 N/A N/A N/A 16.618±0.00 N/A N/A N/A N/A N/A N/A N/A 30.469±0.00 33.005±16.24 5.921±0.00
ENSMUST00000176740 N/A N/A 36.320±2.06 13.828±0.00 49.938±22.11 N/A 74.937±7.03 47.589±4.47 47.406±11.61 N/A 44.676±2.73 N/A 44.670±20.51 6.805±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L5 CIL_0000L5_0003 CGP 1:175059736-175625635
CIL_0000HM CIL_0000HM_0002 CGP 1:175600374-175662116

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004333 IEA fumarate hydratase activity
GO:0005739 IDA mitochondrion
GO:0006099 IEA tricarboxylic acid cycle
GO:0006106 IEA fumarate metabolic process
GO:0045239 IEA tricarboxylic acid cycle enzyme complex
GO:0048873 IMP homeostasis of number of cells within a tissue
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075132 fh fumarate hydratase protein_coding Danio_rerio
ENSG00000091483 FH fumarate hydratase protein_coding Homo_sapiens

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