C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000L5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000096687-ENSDARG00000075132 CGP 7955 12:48783416-48864046
GeneTranscriptPositionBiotype
ENSDARG00000075132 (fh)
fumarate hydratase 		ENSDART00000108477 (fh-001) 48853938-48864046 protein_coding
ENSDARG00000096687 (RGS7 (2 of 2))
regulator of G-protein signaling 7 		ENSDART00000153431 (RGS7 (2 of 2)-001) 48783416-48786108 protein_coding
CIL_0000L5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182901-ENSG00000091483 CGP 9606 1:240775514-241519761
GeneTranscriptPositionBiotype
ENSG00000091483 (FH)
fumarate hydratase 		ENST00000366560 (FH-001) 241497603-241519761 protein_coding
ENST00000493477 (FH-003) 241513680-241519304 processed_transcript
ENST00000497042 (FH-002) 241511867-241513676 processed_transcript
ENSG00000182901 (RGS7)
regulator of G-protein signaling 7 		ENST00000348120 (RGS7-004) 240775515-241355776 protein_coding
ENST00000366562 (RGS7-201) 240775514-241098764 protein_coding
ENST00000366563 (RGS7-003) 240775515-241356915 protein_coding
ENST00000366564 (RGS7-002) 240775515-241357085 protein_coding
ENST00000366565 (RGS7-001) 240775515-241357230 protein_coding
ENST00000401882 (RGS7-202) 240776163-241098762 protein_coding
ENST00000440928 (RGS7-005) 240775515-240868795 protein_coding
ENST00000446183 (RGS7-203) 240775514-241098764 protein_coding
ENSG00000215802 (RFKP1)
riboflavin kinase pseudogene 1 		ENST00000400940 (RFKP1-001) 240823006-240823433 transcribed_processed_pseudogene
ENSG00000224348 (RP11-306K13.1)
 ENST00000424448 (RP11-306K13.1-001) 241305580-241305882 processed_pseudogene
ENSG00000225554 (RP11-527D7.1)
 ENST00000413994 (RP11-527D7.1-002) 241424398-241433492 lincRNA
ENST00000444330 (RP11-527D7.1-001) 241424292-241433328 lincRNA
ENSG00000233615 (HNRNPA1P42)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 42 		ENST00000458678 (HNRNPA1P42-001) 240919653-240920609 processed_pseudogene
ENSG00000238085 (RP11-435F13.2)
 ENST00000437248 (RP11-435F13.2-001) 240998451-240998794 processed_pseudogene
CIL_0000L5_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026527-ENSMUSG00000026526 CGP 10090 1:175059736-175625635
GeneTranscriptPositionBiotype
ENSMUSG00000026526 (Fh1)
fumarate hydratase 1 		ENSMUST00000027810 (Fh1-001) 175600374-175625635 protein_coding
ENSMUST00000130996 (Fh1-004) 175601376-175604285 retained_intron
ENSMUST00000133218 (Fh1-003) 175601378-175606647 retained_intron
ENSMUST00000154956 (Fh1-002) 175614776-175625573 nonsense_mediated_decay
ENSMUST00000176740 (Fh1-005) 175601384-175609713 protein_coding
ENSMUSG00000026527 (Rgs7)
regulator of G protein signaling 7 		ENSMUST00000027812 (Rgs7-201) 175059736-175491130 protein_coding
ENSMUSG00000039783 (Kmo)
kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 		ENSMUST00000040250 (Kmo-001) 175631996-175660853 protein_coding
ENSMUST00000097458 (Kmo-004) 175632180-175662116 protein_coding
ENSMUST00000137174 (Kmo-006) 175632239-175649265 processed_transcript
ENSMUST00000140474 (Kmo-002) 175620381-175659962 nonsense_mediated_decay
ENSMUST00000142223 (Kmo-003) 175632001-175654098 retained_intron
ENSMUST00000150646 (Kmo-005) 175632026-175637565 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000L5_0001ENSDARG00000075132ENSDART00000108477ENSDARG00000096687ENSDART00000153431CIL_0000L5_0002ENSG00000091483ENST00000366560ENST00000493477ENST00000497042ENSG00000182901ENST00000348120ENST00000366562ENST00000366563ENST00000366564ENST00000366565ENST00000401882ENST00000440928ENST00000446183ENSG00000215802ENST00000400940ENSG00000224348ENST00000424448ENSG00000225554ENST00000413994ENST00000444330ENSG00000233615ENST00000458678ENSG00000238085ENST00000437248CIL_0000L5_0003ENSMUSG00000026526ENSMUST00000027810ENSMUST00000130996ENSMUST00000133218ENSMUST00000154956ENSMUST00000176740ENSMUSG00000026527ENSMUST00000027812ENSMUSG00000039783ENSMUST00000040250ENSMUST00000097458ENSMUST00000137174ENSMUST00000140474ENSMUST00000142223ENSMUST00000150646
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000L5_0001ENSDARG00000075132ENSDART00000108477ENSDARG00000096687ENSDART00000153431CIL_0000L5_0002ENSG00000091483ENST00000366560ENST00000497042ENSG00000182901ENST00000348120ENST00000366563ENST00000366564ENST00000366565ENST00000401882ENST00000440928ENST00000446183ENSG00000215802ENST00000400940ENSG00000224348ENST00000424448ENSG00000225554ENST00000413994ENST00000444330ENSG00000233615ENST00000458678ENSG00000238085ENST00000437248CIL_0000L5_0003ENSMUSG00000026526ENSMUST00000027810ENSMUST00000154956ENSMUST00000176740ENSMUSG00000026527ENSMUST00000027812ENSMUSG00000039783ENSMUST00000040250ENSMUST00000097458ENSMUST00000140474ENSMUST00000142223ENSMUST00000150646
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075132 ENSDART00000108477 N/A N/A N/A 23.373±15.93 N/A N/A 136.971±95.37 28.385±0.00 25.193±0.00 N/A 102.158±0.00 N/A N/A N/A
ENSDARG00000096687 ENSDART00000153431 N/A N/A N/A 9.729±0.00 N/A N/A 1.468±0.00 2.901±0.00 N/A N/A 0.508±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091483 ENST00000366560 16.964±0.00 17.987±0.00 3.689±0.00 15.819±5.95 13.454±9.20 12.877±2.54 35.884±22.06 32.465±2.16 11.194±3.41 6.871±2.64 22.834±9.24 10.679±4.70 17.808±6.80 19.098±8.91
ENST00000493477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.226±0.00 39.979±0.00 47.193±0.00
ENSG00000182901 ENST00000348120 N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366563 N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000366564 N/A N/A N/A 9.432±2.01 N/A 0.033±0.00 N/A 0.312±0.00 N/A N/A N/A 0.373±0.00 0.021±0.00 1.678±0.55
ENST00000366565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.384±0.00
ENST00000401882 N/A N/A N/A 7.480±0.00 0.054±0.00 0.101±0.00 N/A N/A N/A 0.091±0.00 N/A 0.010±0.00 N/A N/A
ENST00000440928 N/A 0.007±0.00 N/A N/A N/A 0.172±0.00 N/A 0.654±0.00 0.012±0.00 0.012±0.00 0.055±0.00 0.034±0.00 0.041±0.00 12.000±0.00
ENST00000446183 N/A N/A N/A 7.860±2.94 N/A N/A N/A N/A 0.049±0.00 N/A N/A 0.015±0.00 0.075±0.00 1.482±0.00
ENSG00000215802 ENST00000400940 N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224348 ENST00000424448 N/A 0.087±0.00 N/A 0.201±0.00 N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000225554 ENST00000413994 N/A N/A N/A 1.014±0.00 N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A
ENST00000444330 N/A 0.116±0.00 N/A 1.395±1.14 N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A
ENSG00000233615 ENST00000458678 N/A 0.042±0.00 N/A 0.073±0.00 0.028±0.00 0.089±0.00 N/A 0.042±0.00 N/A N/A 0.049±0.00 N/A N/A 0.016±0.00
ENSG00000238085 ENST00000437248 0.062±0.00 0.396±0.00 N/A 0.149±0.00 0.141±0.00 0.318±0.00 N/A 0.206±0.00 0.120±0.00 0.527±0.00 0.970±0.00 N/A N/A 0.061±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026526 ENSMUST00000027810 18.764±5.29 22.104±6.34 3.217±0.00 6.318±2.92 18.759±4.74 17.037±9.04 32.315±7.88 30.148±12.67 33.163±7.71 6.366±4.73 48.924±19.72 20.194±4.96 14.688±12.04 2.984±2.42
ENSMUST00000130996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154956 N/A N/A N/A 16.618±0.00 N/A N/A N/A N/A N/A N/A N/A 30.469±0.00 33.005±16.24 5.921±0.00
ENSMUST00000176740 N/A N/A 36.320±2.06 13.828±0.00 49.938±22.11 N/A 74.937±7.03 47.589±4.47 47.406±11.61 N/A 44.676±2.73 N/A 44.670±20.51 6.805±0.00
ENSMUSG00000026527 ENSMUST00000027812 0.277±0.00 0.407±0.00 0.235±0.00 16.138±18.44 N/A 0.153±0.06 N/A 0.194±0.04 0.026±0.03 0.143±0.04 0.024±0.01 1.236±0.73 0.068±0.04 0.157±0.19
ENSMUSG00000039783 ENSMUST00000040250 0.730±0.28 N/A 0.862±0.14 0.023±0.00 2.980±0.35 0.298±0.16 0.160±0.04 24.589±4.08 28.956±22.12 0.945±0.27 0.087±0.12 0.282±0.13 4.520±4.30 0.193±0.13
ENSMUST00000097458 0.205±0.00 N/A 0.102±0.00 0.008±0.00 N/A 0.126±0.00 N/A N/A N/A 0.149±0.00 0.025±0.01 0.066±0.02 0.070±0.00 0.088±0.05
ENSMUST00000137174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140474 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A 0.613±0.00 0.012±0.00 0.253±0.17 0.040±0.00 0.318±0.02
ENSMUST00000142223 N/A N/A N/A 0.005±0.00 N/A N/A 0.142±0.00 N/A N/A N/A N/A 0.259±0.04 N/A 0.070±0.00
ENSMUST00000150646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.066±0.00 N/A N/A

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