C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: fumarate hydratase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027810 Fh1-001 ENSMUSG00000026526 10090 - 1:175600374-175625635 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027810
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027810 18.764±5.29 22.104±6.34 3.217±0.00 6.318±2.92 18.759±4.74 17.037±9.04 32.315±7.88 30.148±12.67 33.163±7.71 6.366±4.73 48.924±19.72 20.194±4.96 14.688±12.04 2.984±2.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L5 CIL_0000L5_0003 CGP 1:175059736-175625635
CIL_0000HM CIL_0000HM_0002 CGP 1:175600374-175662116

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004333 IEA fumarate hydratase activity
GO:0005739 IDA mitochondrion
GO:0006099 IEA tricarboxylic acid cycle
GO:0006106 IEA fumarate metabolic process
GO:0045239 IEA tricarboxylic acid cycle enzyme complex
GO:0048873 IMP homeostasis of number of cells within a tissue
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366560 FH-001 protein_coding Homo_sapiens 0 1794
ENST00000493477 FH-003 processed_transcript Homo_sapiens 0 193
ENST00000497042 FH-002 processed_transcript Homo_sapiens 0 372
ENST00000515618 RP11-1084J3.3-001 processed_pseudogene Homo_sapiens 0 579

Loading