C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: origin recognition complex, subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028098 Orc4-001 ENSMUSG00000026761 10090 - 2:48902824-48949276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000028098
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000028098 3.811±0.50 7.881±0.77 16.595±3.03 2.869±0.17 3.117±0.25 2.996±0.67 3.992±1.88 5.084±0.77 2.730±0.17 5.257±0.05 6.657±2.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GY CIL_0007GY_0002 CGP 2:44983634-48903269
CIL_0006MB CIL_0006MB_0002 CGP 2:48814109-48950277
CIL_0006MC CIL_0006MC_0002 CGP 2:48902824-49322284

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003688 IEA DNA replication origin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005664 ISS nuclear origin of replication recognition complex
GO:0006260 TAS DNA replication
GO:0006270 IEA DNA replication initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241416 ACVR2A-001 protein_coding Homo_sapiens 0 558
ENST00000264169 ORC4-201 protein_coding Homo_sapiens 0 1572
ENST00000392857 ORC4-001 protein_coding Homo_sapiens 0 1572
ENST00000416719 ORC4-002 protein_coding Homo_sapiens 0 486
ENST00000440042 ORC4-003 protein_coding Homo_sapiens 0 409
ENST00000457954 ORC4-006 protein_coding Homo_sapiens 0 401
ENST00000461711 ORC4-005 processed_transcript Homo_sapiens 0 540
ENST00000478904 ORC4-008 retained_intron Homo_sapiens 0 619
ENST00000481488 ORC4-010 retained_intron Homo_sapiens 0 213
ENST00000483608 ORC4-012 retained_intron Homo_sapiens 0 442
ENST00000490200 ORC4-004 processed_transcript Homo_sapiens 0 521
ENST00000495601 ORC4-007 retained_intron Homo_sapiens 0 327
ENST00000496670 ORC4-009 processed_transcript Homo_sapiens 0 542
ENST00000535373 ORC4-202 protein_coding Homo_sapiens 0 1572
ENST00000535787 ACVR2A-201 protein_coding Homo_sapiens 0 560
ENST00000536575 ORC4-203 protein_coding Homo_sapiens 0 1351
ENST00000540442 ORC4-204 protein_coding Homo_sapiens 0 1531

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