C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syntaxin binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026797 Stxbp1 10090 - 2:32787602-32847239 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000050000 Stxbp1-001 32787602-32847239 protein_coding
  ENSMUST00000077458 Stxbp1-003 32787962-32847164 protein_coding
  ENSMUST00000113222 Stxbp1-002 32787607-32817190 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050000ENSMUST00000077458ENSMUST00000113222
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050000 3.992±0.42 3.720±0.51 6.356±0.58 71.809±21.92 2.898±0.94 6.793±1.68 2.214±1.12 3.978±0.44 0.864±0.65 11.389±2.18 0.445±0.13 3.881±1.36 1.428±0.51 3.960±1.82
ENSMUST00000077458 3.033±0.74 0.836±0.00 1.746±0.11 55.006±53.00 2.188±1.00 1.690±0.27 2.328±0.89 1.173±0.19 0.397±0.13 3.815±1.97 0.377±0.22 2.867±1.66 1.073±0.91 1.544±0.53
ENSMUST00000113222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 1.008±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_0000HA CIL_0000HA_0002 CGP 2:32787602-32925254

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0002576 IEA platelet degranulation
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005886 TAS plasma membrane
GO:0006887 IMP exocytosis
GO:0006904 IMP vesicle docking involved in exocytosis
GO:0007269 IMP neurotransmitter secretion
GO:0007274 IMP neuromuscular synaptic transmission
GO:0007412 IMP axon target recognition
GO:0010807 IEA regulation of synaptic vesicle priming
GO:0015031 IEA protein transport
GO:0016188 IMP synaptic vesicle maturation
GO:0017075 ISO syntaxin-1 binding
GO:0019901 IEA protein kinase binding
GO:0019904 IEA protein domain specific binding
GO:0019905 IEA syntaxin binding
GO:0031091 IEA platelet alpha granule
GO:0031629 TAS synaptic vesicle fusion to presynaptic membrane
GO:0032229 IDA negative regulation of synaptic transmission, GABAergic
GO:0042802 IEA identical protein binding
GO:0043234 IEA protein complex
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0044822 IEA poly(A) RNA binding
GO:0045921 IEA positive regulation of exocytosis
GO:0045956 IDA positive regulation of calcium ion-dependent exocytosis
GO:0047485 IEA protein N-terminus binding
GO:0050821 IEA protein stabilization
GO:0060292 IMP long term synaptic depression
GO:0070062 IEA extracellular vesicular exosome
GO:0070527 IEA platelet aggregation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001994 stxbp1a syntaxin binding protein 1a protein_coding Danio_rerio
ENSDARG00000056036 stxbp1b syntaxin binding protein 1b protein_coding Danio_rerio
ENSDARG00000088599 stxbp1b syntaxin binding protein 1b protein_coding Danio_rerio
ENSG00000136854 STXBP1 syntaxin binding protein 1 protein_coding Homo_sapiens

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