C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000HA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088599-ENSDARG00000091554 CGP 7955 Zv9_scaffold3528:58466-109891
GeneTranscriptPositionBiotype
ENSDARG00000088599 (stxbp1b)
syntaxin binding protein 1b
ENSDART00000113495 (stxbp1b-201) 58466-84634 protein_coding
ENSDARG00000091554 (FAM129B (3 of 3))
family with sequence similarity 129, member B
ENSDART00000122162 (FAM129B (3 of 3)-201) 88952-109891 protein_coding
CIL_0000HA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026797-ENSMUSG00000026796 CGP 10090 2:32787602-32925254
GeneTranscriptPositionBiotype
ENSMUSG00000026792 (Lrsam1)
leucine rich repeat and sterile alpha motif containing 1
ENSMUST00000028132 (Lrsam1-201) 32925216-32961255 protein_coding
ENSMUST00000113200 (Lrsam1-001) 32925220-32961614 protein_coding
ENSMUST00000124492 (Lrsam1-002) 32957249-32961593 protein_coding
ENSMUST00000127321 (Lrsam1-006) 32954221-32961599 protein_coding
ENSMUST00000133832 (Lrsam1-004) 32954223-32961592 protein_coding
ENSMUST00000138015 (Lrsam1-005) 32961074-32961606 processed_transcript
ENSMUST00000145578 (Lrsam1-003) 32957256-32961593 protein_coding
ENSMUST00000145699 (Lrsam1-007) 32960247-32961600 processed_transcript
ENSMUST00000147528 (Lrsam1-008) 32954236-32959906 protein_coding
ENSMUSG00000026796 (Fam129b)
family with sequence similarity 129, member B
ENSMUST00000028135 (Fam129b-001) 32876114-32925254 protein_coding
ENSMUST00000125347 (Fam129b-003) 32910908-32912587 retained_intron
ENSMUST00000138781 (Fam129b-002) 32895632-32909958 protein_coding
ENSMUST00000150875 (Fam129b-005) 32918641-32922107 processed_transcript
ENSMUST00000151607 (Fam129b-006) 32921642-32923639 processed_transcript
ENSMUST00000154514 (Fam129b-004) 32914711-32921024 processed_transcript
ENSMUSG00000026797 (Stxbp1)
syntaxin binding protein 1
ENSMUST00000050000 (Stxbp1-001) 32787602-32847239 protein_coding
ENSMUST00000077458 (Stxbp1-003) 32787962-32847164 protein_coding
ENSMUST00000113222 (Stxbp1-002) 32787607-32817190 protein_coding
ENSMUSG00000064652 (Gm24165)
predicted gene, 24165
ENSMUST00000082718 (Gm24165-201) 32831989-32832116 snoRNA
ENSMUSG00000085397 (Gm13524)
predicted gene 13524
ENSMUST00000125869 (Gm13524-001) 32846186-32848168 antisense
ENSMUSG00000087496 (Gm13523)
predicted gene 13523
ENSMUST00000151820 (Gm13523-001) 32873755-32876001 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HA_0001ENSDARG00000088599ENSDART00000113495ENSDARG00000091554ENSDART00000122162CIL_0000HA_0002ENSMUSG00000026792ENSMUST00000028132ENSMUST00000113200ENSMUST00000124492ENSMUST00000127321ENSMUST00000133832ENSMUST00000138015ENSMUST00000145578ENSMUST00000145699ENSMUST00000147528ENSMUSG00000026796ENSMUST00000028135ENSMUST00000125347ENSMUST00000138781ENSMUST00000150875ENSMUST00000151607ENSMUST00000154514ENSMUSG00000026797ENSMUST00000050000ENSMUST00000077458ENSMUST00000113222ENSMUSG00000064652ENSMUST00000082718ENSMUSG00000085397ENSMUST00000125869ENSMUSG00000087496ENSMUST00000151820
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HA_0001ENSDARG00000088599ENSDART00000113495ENSDARG00000091554ENSDART00000122162CIL_0000HA_0002ENSMUSG00000026792ENSMUST00000028132ENSMUST00000113200ENSMUSG00000026796ENSMUST00000028135ENSMUSG00000026797ENSMUST00000050000ENSMUST00000077458ENSMUST00000113222ENSMUSG00000064652ENSMUST00000082718ENSMUSG00000085397ENSMUST00000125869ENSMUSG00000087496ENSMUST00000151820
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000088599 ENSDART00000113495 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091554 ENSDART00000122162 N/A N/A N/A N/A N/A N/A N/A 0.331±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026792 ENSMUST00000028132 N/A 11.350±1.19 N/A 5.487±0.00 N/A N/A N/A N/A 5.115±0.99 N/A N/A 10.435±1.15 N/A N/A
ENSMUST00000113200 8.135±0.29 N/A N/A 6.561±2.34 N/A N/A 4.381±0.35 6.066±0.78 4.800±0.02 N/A N/A N/A N/A 3.382±0.00
ENSMUST00000124492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026796 ENSMUST00000028135 20.448±5.55 14.100±2.27 43.049±10.86 12.503±5.67 26.664±5.89 37.699±5.68 8.632±2.36 12.671±2.84 4.524±0.64 118.530±11.11 N/A 24.584±3.07 60.046±49.23 N/A
ENSMUST00000125347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026797 ENSMUST00000050000 3.992±0.42 3.720±0.51 6.356±0.58 71.809±21.92 2.898±0.94 6.793±1.68 2.214±1.12 3.978±0.44 0.864±0.65 11.389±2.18 0.445±0.13 3.881±1.36 1.428±0.51 3.960±1.82
ENSMUST00000077458 3.033±0.74 0.836±0.00 1.746±0.11 55.006±53.00 2.188±1.00 1.690±0.27 2.328±0.89 1.173±0.19 0.397±0.13 3.815±1.97 0.377±0.22 2.867±1.66 1.073±0.91 1.544±0.53
ENSMUST00000113222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 1.008±0.00 N/A N/A
ENSMUSG00000064652 ENSMUST00000082718 N/A N/A 10.856±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085397 ENSMUST00000125869 0.128±0.06 N/A 0.108±0.00 0.368±0.00 0.163±0.00 0.111±0.00 0.095±0.03 0.105±0.04 0.076±0.03 0.126±0.05 0.068±0.02 0.192±0.09 0.098±0.09 0.133±0.06
ENSMUSG00000087496 ENSMUST00000151820 0.231±0.10 0.125±0.01 0.197±0.05 0.484±0.12 0.181±0.06 0.365±0.07 N/A 0.125±0.04 0.080±0.00 0.501±0.09 0.111±0.03 0.410±0.18 0.513±0.51 N/A

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