C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050000 Stxbp1-001 ENSMUSG00000026797 10090 - 2:32787602-32847239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000050000
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000050000 3.992±0.42 3.720±0.51 6.356±0.58 71.809±21.92 2.898±0.94 6.793±1.68 2.214±1.12 3.978±0.44 0.864±0.65 11.389±2.18 0.445±0.13 3.881±1.36 1.428±0.51 3.960±1.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_0000HA CIL_0000HA_0002 CGP 2:32787602-32925254

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005886 TAS plasma membrane
GO:0006887 IMP exocytosis
GO:0006904 IMP vesicle docking involved in exocytosis
GO:0007269 IMP neurotransmitter secretion
GO:0007274 IMP neuromuscular synaptic transmission
GO:0007412 IMP axon target recognition
GO:0015031 IEA protein transport
GO:0016188 IMP synaptic vesicle maturation
GO:0017075 ISO syntaxin-1 binding
GO:0031629 TAS synaptic vesicle fusion to presynaptic membrane
GO:0032229 IDA negative regulation of synaptic transmission, GABAergic
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0045956 IDA positive regulation of calcium ion-dependent exocytosis
GO:0060292 IMP long term synaptic depression

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373299 STXBP1-002 protein_coding Homo_sapiens 0 2466
ENST00000373302 STXBP1-001 protein_coding Homo_sapiens 0 2320
ENST00000494254 STXBP1-005 protein_coding Homo_sapiens 0 302

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