C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700026L06 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026809 1700026L06Rik 10090 - 2:28692080-28699727 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102877 1700026L06Rik-001 28692080-28699651 protein_coding
  ENSMUST00000124840 1700026L06Rik-002 28692084-28699683 protein_coding
  ENSMUST00000144209 1700026L06Rik-003 28693012-28699727 processed_transcript
  ENSMUST00000145014 1700026L06Rik-004 28693706-28699674 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102877ENSMUST00000124840ENSMUST00000144209ENSMUST00000145014
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102877 0.409±0.20 0.154±0.02 0.222±0.00 0.300±0.00 0.800±0.22 0.283±0.10 0.218±0.07 N/A 0.524±0.26 4.607±1.90 0.081±0.00 3.584±1.17 0.946±0.20 103.022±0.00
ENSMUST00000124840 0.419±0.07 N/A 0.471±0.00 0.441±0.12 0.228±0.15 N/A N/A 0.440±0.07 0.755±0.35 5.377±0.18 N/A 2.707±1.22 0.696±0.09 329.429±12.72
ENSMUST00000144209 0.355±0.16 0.186±0.01 0.268±0.00 0.154±0.00 0.374±0.27 0.531±0.19 0.520±0.02 0.586±0.18 0.384±0.15 4.199±1.21 N/A 2.544±1.28 0.980±0.41 243.489±88.68
ENSMUST00000145014 0.143±0.00 0.503±0.25 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.855±0.00 2.460±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XC CIL_0002XC_0002 CGP 2:28641228-28699727
CIL_0002XE CIL_0002XE_0002 CGP 2:28692080-28813165

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005881 ISS cytoplasmic microtubule
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068130 C5H9orf9 chromosome 9 open reading frame 9 protein_coding Danio_rerio
ENSG00000165698 C9orf9 chromosome 9 open reading frame 9 protein_coding Homo_sapiens

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