C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700026L06 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102877 1700026L06Rik-001 ENSMUSG00000026809 10090 - 2:28692080-28699651 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000102877
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102877 0.409±0.20 0.154±0.02 0.222±0.00 0.300±0.00 0.800±0.22 0.283±0.10 0.218±0.07 0.524±0.26 4.607±1.90 0.081±0.00 3.584±1.17 0.946±0.20 103.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XC CIL_0002XC_0002 CGP 2:28641228-28699727
CIL_0002XE CIL_0002XE_0002 CGP 2:28692080-28813165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005881 ISS cytoplasmic microtubule
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350499 C9orf9-003 protein_coding Homo_sapiens 0 647
ENST00000356311 C9orf9-002 protein_coding Homo_sapiens 0 566
ENST00000372136 C9orf9-001 protein_coding Homo_sapiens 0 564

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