C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700026L06 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124840 1700026L06Rik-002 ENSMUSG00000026809 10090 - 2:28692084-28699683 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000124840
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000124840 0.419±0.07 0.471±0.00 0.441±0.12 0.228±0.15 0.440±0.07 0.755±0.35 5.377±0.18 2.707±1.22 0.696±0.09 329.429±12.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XC CIL_0002XC_0002 CGP 2:28641228-28699727
CIL_0002XE CIL_0002XE_0002 CGP 2:28692080-28813165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005881 ISS cytoplasmic microtubule
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350499 C9orf9-003 protein_coding Homo_sapiens 0 656
ENST00000356311 C9orf9-002 protein_coding Homo_sapiens 0 579
ENST00000372136 C9orf9-001 protein_coding Homo_sapiens 0 564

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