C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002XC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026048-ENSDARG00000068130 CGP 7955 5:31291003-31310107
GeneTranscriptPositionBiotype
ENSDARG00000026048 (tsc1a)
tuberous sclerosis 1a
ENSDART00000035400 (tsc1a-001) 31291003-31305911 protein_coding
ENSDARG00000068130 (C5H9orf9)
chromosome 9 open reading frame 9
ENSDART00000098336 (C5H9orf9-001) 31308428-31310076 protein_coding
ENSDART00000134916 (C5H9orf9-002) 31308530-31310107 retained_intron
CIL_0002XC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026812-ENSMUSG00000026809 CGP 10090 2:28641228-28699727
GeneTranscriptPositionBiotype
ENSMUSG00000026809 (1700026L06Rik)
RIKEN cDNA 1700026L06 gene
ENSMUST00000102877 (1700026L06Rik-001) 28692080-28699651 protein_coding
ENSMUST00000124840 (1700026L06Rik-002) 28692084-28699683 protein_coding
ENSMUST00000144209 (1700026L06Rik-003) 28693012-28699727 processed_transcript
ENSMUST00000145014 (1700026L06Rik-004) 28693706-28699674 processed_transcript
ENSMUSG00000026812 (Tsc1)
tuberous sclerosis 1
ENSMUST00000028155 (Tsc1-002) 28641237-28691167 protein_coding
ENSMUST00000113867 (Tsc1-007) 28641243-28691167 protein_coding
ENSMUST00000113869 (Tsc1-001) 28641241-28691167 protein_coding
ENSMUST00000113870 (Tsc1-201) 28658567-28691167 protein_coding
ENSMUST00000124507 (Tsc1-008) 28641254-28667959 retained_intron
ENSMUST00000125715 (Tsc1-010) 28671015-28673187 retained_intron
ENSMUST00000133565 (Tsc1-004) 28641241-28688548 nonsense_mediated_decay
ENSMUST00000139642 (Tsc1-005) 28672278-28673329 retained_intron
ENSMUST00000150274 (Tsc1-009) 28663392-28665965 retained_intron
ENSMUST00000153625 (Tsc1-006) 28641250-28673753 retained_intron
ENSMUST00000156857 (Tsc1-003) 28641228-28672507 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XC_0001ENSDARG00000026048ENSDART00000035400ENSDARG00000068130ENSDART00000098336ENSDART00000134916CIL_0002XC_0002ENSMUSG00000026809ENSMUST00000102877ENSMUST00000124840ENSMUST00000144209ENSMUST00000145014ENSMUSG00000026812ENSMUST00000028155ENSMUST00000113867ENSMUST00000113869ENSMUST00000113870ENSMUST00000124507ENSMUST00000125715ENSMUST00000133565ENSMUST00000139642ENSMUST00000150274ENSMUST00000153625ENSMUST00000156857
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XC_0001ENSDARG00000026048ENSDART00000035400ENSDARG00000068130ENSDART00000098336ENSDART00000134916CIL_0002XC_0002ENSMUSG00000026809ENSMUST00000102877ENSMUST00000124840ENSMUST00000144209ENSMUST00000145014ENSMUSG00000026812ENSMUST00000028155ENSMUST00000113867ENSMUST00000113869ENSMUST00000113870ENSMUST00000133565ENSMUST00000156857
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000026048 ENSDART00000035400 N/A N/A N/A N/A N/A N/A 1.837±0.34 5.647±0.00 1.227±0.00 N/A N/A N/A N/A N/A
ENSDARG00000068130 ENSDART00000098336 N/A N/A N/A 0.298±0.11 N/A N/A 0.556±0.00 1.833±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000134916 N/A N/A N/A 0.326±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026809 ENSMUST00000102877 0.409±0.20 0.154±0.02 0.222±0.00 0.300±0.00 0.800±0.22 0.283±0.10 0.218±0.07 N/A 0.524±0.26 4.607±1.90 0.081±0.00 3.584±1.17 0.946±0.20 103.022±0.00
ENSMUST00000124840 0.419±0.07 N/A 0.471±0.00 0.441±0.12 0.228±0.15 N/A N/A 0.440±0.07 0.755±0.35 5.377±0.18 N/A 2.707±1.22 0.696±0.09 329.429±12.72
ENSMUST00000144209 0.355±0.16 0.186±0.01 0.268±0.00 0.154±0.00 0.374±0.27 0.531±0.19 0.520±0.02 0.586±0.18 0.384±0.15 4.199±1.21 N/A 2.544±1.28 0.980±0.41 243.489±88.68
ENSMUST00000145014 0.143±0.00 0.503±0.25 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.855±0.00 2.460±0.00 N/A
ENSMUSG00000026812 ENSMUST00000028155 1.435±0.71 1.581±0.42 2.040±0.14 4.997±0.19 3.773±1.28 3.501±1.27 2.412±0.56 3.561±0.79 2.736±0.90 2.609±0.00 2.373±0.86 4.479±1.42 2.932±0.82 3.122±1.24
ENSMUST00000113867 N/A 1.716±0.34 1.259±0.10 5.028±0.06 2.301±0.62 1.159±0.30 1.515±0.75 1.607±0.49 1.077±0.40 1.347±0.15 4.197±0.78 2.432±1.20 1.913±0.99 1.024±0.00
ENSMUST00000113869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.917±0.00 N/A N/A
ENSMUST00000113870 1.019±0.00 2.473±1.37 N/A 1.708±0.32 2.262±1.32 1.953±0.06 N/A 2.357±1.20 1.146±0.38 1.741±0.81 1.212±0.00 4.458±0.00 2.562±0.49 N/A
ENSMUST00000124507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133565 N/A N/A N/A 7.317±0.00 N/A N/A N/A N/A N/A N/A N/A 1.771±0.00 3.350±1.54 3.741±0.22
ENSMUST00000139642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156857 N/A N/A N/A N/A 8.514±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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