C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: far upstream element (FUSE) binding protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026843 Fubp3 10090 + 2:31572651-31617526 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055244 Fubp3-201 31572725-31617519 protein_coding
  ENSMUST00000113482 Fubp3-001 31572651-31617526 protein_coding
  ENSMUST00000129903 Fubp3-007 31604706-31615932 protein_coding
  ENSMUST00000130578 Fubp3-009 31614761-31617518 processed_transcript
  ENSMUST00000132534 Fubp3-002 31611634-31617421 protein_coding
  ENSMUST00000134553 Fubp3-006 31603271-31613107 processed_transcript
  ENSMUST00000137504 Fubp3-005 31572792-31583668 processed_transcript
  ENSMUST00000137889 Fubp3-003 31572791-31595271 protein_coding
  ENSMUST00000150473 Fubp3-008 31612531-31616716 protein_coding
  ENSMUST00000154050 Fubp3-004 31572827-31598548 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055244ENSMUST00000113482ENSMUST00000129903ENSMUST00000132534ENSMUST00000134553ENSMUST00000150473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055244 4.135±2.94 N/A 4.821±0.02 4.491±2.21 2.574±0.00 N/A 1.012±0.48 2.719±0.47 3.868±1.48 4.342±2.14 0.808±0.47 3.698±1.80 6.293±1.64 0.947±0.22
ENSMUST00000113482 5.414±1.14 8.074±1.33 5.752±0.47 3.343±0.85 2.028±0.94 5.969±1.92 0.979±0.00 4.976±1.32 3.609±1.21 6.695±2.73 2.070±0.77 6.017±1.29 10.177±4.26 2.018±0.66
ENSMUST00000129903 2.000±0.00 5.835±1.11 N/A N/A 2.859±0.59 5.051±2.08 N/A 3.387±0.00 2.649±0.71 3.131±0.24 N/A 6.818±2.36 N/A N/A
ENSMUST00000132534 3.529±1.95 10.166±1.30 N/A N/A 5.320±1.39 6.435±1.35 1.403±0.00 4.963±0.97 1.842±0.54 5.966±0.30 N/A 9.106±2.07 1.298±0.00 N/A
ENSMUST00000134553 N/A N/A N/A 8.968±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150473 4.231±0.00 N/A N/A N/A N/A 10.735±0.78 N/A N/A 5.445±0.00 N/A N/A 12.864±1.12 11.784±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000936 CIL_000936_0002 VISTA 2:31199311-31800827
CIL_0008XQ CIL_0008XQ_0002 VISTA 2:31340644-31941311
CIL_0005UH CIL_0005UH_0002 CGP 2:31470207-31617526
CIL_0006I8 CIL_0006I8_0002 CGP 2:31572651-31655795

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0010628 IEA positive regulation of gene expression
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0045893 IEA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086896 CABZ01073334.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000107164 FUBP3 far upstream element (FUSE) binding protein 3 protein_coding Homo_sapiens

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