C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: far upstream element (FUSE) binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055244 Fubp3-201 ENSMUSG00000026843 10090 + 2:31572725-31617519 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055244
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055244 4.135±2.94 4.821±0.02 4.491±2.21 2.574±0.00 1.012±0.48 2.719±0.47 3.868±1.48 4.342±2.14 0.808±0.47 3.698±1.80 6.293±1.64 0.947±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000936 CIL_000936_0002 VISTA 2:31199311-31800827
CIL_0008XQ CIL_0008XQ_0002 VISTA 2:31340644-31941311
CIL_0005UH CIL_0005UH_0002 CGP 2:31470207-31617526
CIL_0006I8 CIL_0006I8_0002 CGP 2:31572651-31655795

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0010628 IEA positive regulation of gene expression
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0045893 IEA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319725 FUBP3-002 protein_coding Homo_sapiens 0 2058
ENST00000465949 FUBP3-004 processed_transcript Homo_sapiens 0 398
ENST00000467100 FUBP3-003 processed_transcript Homo_sapiens 4e-30 137
ENST00000492199 FUBP3-006 processed_transcript Homo_sapiens 0 202

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