C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005UH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130707-ENSG00000107164 CGP 9606 9:130444929-130638352
GeneTranscriptPositionBiotype
ENSG00000107164 (FUBP3)
far upstream element (FUSE) binding protein 3 		ENST00000319725 (FUBP3-002) 130579606-130638352 protein_coding
ENST00000465949 (FUBP3-004) 130581095-130613022 processed_transcript
ENST00000467100 (FUBP3-003) 130578965-130582086 processed_transcript
ENST00000472006 (FUBP3-005) 130634621-130637051 processed_transcript
ENST00000487406 (FUBP3-007) 130620414-130632022 processed_transcript
ENST00000492199 (FUBP3-006) 130635864-130637233 processed_transcript
ENSG00000130707 (ASS1)
argininosuccinate synthase 1 		ENST00000352480 (ASS1-002) 130444929-130501274 protein_coding
ENST00000372386 (ASS1-001) 130479856-130501178 processed_transcript
ENST00000372393 (ASS1-003) 130444988-130501255 protein_coding
ENST00000372394 (ASS1-004) 130444962-130501274 protein_coding
ENST00000422569 (ASS1-005) 130444992-130471513 protein_coding
ENST00000443588 (ASS1-010) 130452223-130471514 protein_coding
ENST00000467695 (ASS1-009) 130458518-130479898 retained_intron
ENST00000470849 (ASS1-008) 130476549-130489421 retained_intron
ENST00000492400 (ASS1-007) 130476284-130489429 processed_transcript
ENST00000493984 (ASS1-006) 130466474-130489404 retained_intron
CIL_0005UH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000076441-ENSMUSG00000026843 CGP 10090 2:31470207-31617526
GeneTranscriptPositionBiotype
ENSMUSG00000026843 (Fubp3)
far upstream element (FUSE) binding protein 3 		ENSMUST00000055244 (Fubp3-201) 31572725-31617519 protein_coding
ENSMUST00000113482 (Fubp3-001) 31572651-31617526 protein_coding
ENSMUST00000129903 (Fubp3-007) 31604706-31615932 protein_coding
ENSMUST00000130578 (Fubp3-009) 31614761-31617518 processed_transcript
ENSMUST00000132534 (Fubp3-002) 31611634-31617421 protein_coding
ENSMUST00000134553 (Fubp3-006) 31603271-31613107 processed_transcript
ENSMUST00000137504 (Fubp3-005) 31572792-31583668 processed_transcript
ENSMUST00000137889 (Fubp3-003) 31572791-31595271 protein_coding
ENSMUST00000150473 (Fubp3-008) 31612531-31616716 protein_coding
ENSMUST00000154050 (Fubp3-004) 31572827-31598548 processed_transcript
ENSMUSG00000076441 (Ass1)
argininosuccinate synthetase 1 		ENSMUST00000102840 (Ass1-001) 31470207-31520672 protein_coding
ENSMUST00000126474 (Ass1-002) 31497772-31510155 processed_transcript
ENSMUST00000130195 (Ass1-003) 31518490-31520531 processed_transcript
ENSMUSG00000084226 (Gm13426)
predicted gene 13426 		ENSMUST00000117887 (Gm13426-001) 31551901-31552695 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UH_0001ENSG00000107164ENST00000319725ENST00000465949ENST00000467100ENST00000472006ENST00000487406ENST00000492199ENSG00000130707ENST00000352480ENST00000372386ENST00000372393ENST00000372394ENST00000422569ENST00000443588ENST00000467695ENST00000470849ENST00000492400ENST00000493984CIL_0005UH_0002ENSMUSG00000026843ENSMUST00000055244ENSMUST00000113482ENSMUST00000129903ENSMUST00000130578ENSMUST00000132534ENSMUST00000134553ENSMUST00000137504ENSMUST00000137889ENSMUST00000150473ENSMUST00000154050ENSMUSG00000076441ENSMUST00000102840ENSMUST00000126474ENSMUST00000130195ENSMUSG00000084226ENSMUST00000117887
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UH_0001ENSG00000107164ENST00000319725ENST00000465949ENST00000467100ENST00000487406ENSG00000130707ENST00000352480ENST00000372386ENST00000372393ENST00000372394ENST00000443588ENST00000492400CIL_0005UH_0002ENSMUSG00000026843ENSMUST00000055244ENSMUST00000113482ENSMUST00000129903ENSMUST00000132534ENSMUST00000134553ENSMUST00000150473ENSMUSG00000076441ENSMUST00000102840ENSMUSG00000084226ENSMUST00000117887
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107164 ENST00000319725 13.033±0.00 15.910±0.00 1.038±0.00 10.074±7.72 6.952±5.12 6.678±4.09 3.858±3.11 6.045±0.43 6.953±2.38 4.673±2.58 1.527±1.32 13.227±5.98 14.751±5.04 12.300±2.84
ENST00000465949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.157±0.00
ENST00000467100 N/A N/A 0.895±0.00 N/A N/A 1.763±0.00 N/A N/A N/A N/A N/A 2.103±0.00 N/A N/A
ENST00000472006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487406 8.846±0.00 N/A N/A N/A N/A N/A N/A N/A 3.364±0.00 N/A 0.606±0.00 N/A N/A 8.194±0.00
ENST00000492199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130707 ENST00000352480 146.567±0.00 18.213±0.00 52.868±0.00 5.170±0.10 56.876±49.22 21.836±13.92 5.316±4.84 145.830±80.78 141.726±134.27 32.977±30.18 12.966±11.13 46.329±16.19 38.117±10.27 35.433±25.54
ENST00000372386 82.776±0.00 14.534±0.00 N/A 17.624±0.00 48.035±0.00 40.843±0.00 N/A 165.350±0.00 186.036±0.00 20.497±0.00 N/A 30.052±10.61 N/A 52.486±0.00
ENST00000372393 N/A 14.381±0.00 N/A 10.633±0.00 38.403±0.00 10.372±0.00 4.883±0.00 80.646±0.00 N/A N/A N/A 23.384±6.40 17.804±2.07 13.816±7.53
ENST00000372394 N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.490±0.00 N/A N/A N/A
ENST00000467695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492400 N/A N/A N/A 5.936±0.00 N/A N/A 0.867±0.00 N/A N/A 2.759±0.00 N/A N/A N/A N/A
ENST00000493984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026843 ENSMUST00000055244 4.135±2.94 N/A 4.821±0.02 4.491±2.21 2.574±0.00 N/A 1.012±0.48 2.719±0.47 3.868±1.48 4.342±2.14 0.808±0.47 3.698±1.80 6.293±1.64 0.947±0.22
ENSMUST00000113482 5.414±1.14 8.074±1.33 5.752±0.47 3.343±0.85 2.028±0.94 5.969±1.92 0.979±0.00 4.976±1.32 3.609±1.21 6.695±2.73 2.070±0.77 6.017±1.29 10.177±4.26 2.018±0.66
ENSMUST00000129903 2.000±0.00 5.835±1.11 N/A N/A 2.859±0.59 5.051±2.08 N/A 3.387±0.00 2.649±0.71 3.131±0.24 N/A 6.818±2.36 N/A N/A
ENSMUST00000130578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132534 3.529±1.95 10.166±1.30 N/A N/A 5.320±1.39 6.435±1.35 1.403±0.00 4.963±0.97 1.842±0.54 5.966±0.30 N/A 9.106±2.07 1.298±0.00 N/A
ENSMUST00000134553 N/A N/A N/A 8.968±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150473 4.231±0.00 N/A N/A N/A N/A 10.735±0.78 N/A N/A 5.445±0.00 N/A N/A 12.864±1.12 11.784±0.00 N/A
ENSMUST00000154050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000076441 ENSMUST00000102840 2.562±0.48 1.995±0.29 15.218±0.43 8.383±9.14 7.668±2.44 16.042±1.16 2.016±0.19 1012.391±60.53 916.296±774.85 7.433±0.66 0.801±0.19 13.775±2.59 153.113±38.89 17.198±1.67
ENSMUST00000126474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084226 ENSMUST00000117887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.01 0.124±0.00

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